Transcript | Ll_transcript_493333 |
---|---|
CDS coordinates | 3-2558 (+) |
Peptide sequence | EDIPGLPPIREIEFAIDLVPGTGPISIAPYRMAPLELAELKKQLEGLLEKQFVRPSVSPWGAPVLFVKKKDGSTRLCTDYRQLNKVTIKNKYPLPRIDDLMDQLRGATVFSKIDLRSGYHQIRVKAEDIPKTAFRTRYGHYEYLVMPFGVTNAPAIFMDYMNRIFHPYLDTFVVVFIDDILIYSKNKEEHAEHLRVVLQILKDNQLYAKLSKCEFWLESVNFLGHVISKGGIAVDPAKVETVMDWNSPKSVTEIRSFLGLAGYYRKFIEGFSKLALPLKMLTRKDKAFVWTAKCEENFQELKKRLTTAPVLILPDPSVNYNVYCDASKQGLGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAIVYALKVWRHHLYGVRFEVFSDHKSLKYLFDQKELNMRQRRWMEFLKDYDFDLQYHPGKANVVADALSRKSLHLATLMISELRLIEEFRDMNLAVQVGPKSLICGMLTVRSDFMNQLKGLQDVDPELQEKRKFLEEGKAPEFQIGNGGVLKCKDRVCVPKDSDLRKSILDEAHKSKLSIHPGATKMYQDLKKMFWWSGMKKDVAEYVSRCLVCQKAKIEHQRPGGELQPLDIPVWKWDSISMDFVSGFPKTQKGFDAVWVIVDRLSKVAHFLPINMKYSLERLAEIYIKEIVRLHGIPVSIISDRDPRFTSKIWNGLQAALGTKLKMSSAYHPQTDGQSERTIQSLEDLLRACVLDNAGNWADFLHLIEFTYNNSFHSSIGMAPYEALYGRKCRTPLCWFETGENLMLGPDVVQQTTEKIRSIREHMKTAQSRQKSYYDKRRNPLSFEEGDHVFMRVVPTTGIGRLLKARKLTPKFIGPYQILRKV* |
ORF Type | 5prime_partial |
Blastp | Transposon Tf2-9 polyprotein from Schizosaccharomyces with 33.99% of identity |
---|---|
Blastx | Transposon Tf2-9 polyprotein from Schizosaccharomyces with 34.08% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPAC167.08) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_012575125.1) |
Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer