Transcript | Ll_transcript_493263 |
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CDS coordinates | 271-1425 (+) |
Peptide sequence | MATDNFVQPAIPRFDGHYEHWSMLMENLLRSKEYWQVVEDGVATPEEGRELNAAQNREHDAMKLKDLRAKNFLFEVIDRSILETILCKETSKDIWDSMKKKYQGSSRVKRAQLQASRRDFETLQMKESESVTDYCSRVMGIANSMRIHGEKMGDTLIVEKILSSLTPKFDYVVCSIEESNDTDELPLDELQSSLLVHEQKMHRSSRVEEQALKASTNTHSNNFRGRGRGRGRGRRYGGRGNRDSSRNFKDNPHQQQGRGRIYEKPKVECFRCHKFGHYAYECYTKLTNYKGKGEQSNFVEEKEEETLLMTSHEKFQSDVWYIDIGCSNHMCGSKSSFTYLDENFHSKVSFGDCSTVNVMGKETLKLKLRMVWWKPSLMYFMFLT* |
ORF Type | complete |
Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 21.99% of identity |
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Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.15% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019465391.1) |
Pfam | gag-polypeptide of LTR copia-type (PF14223.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer