Protein coding transcript 1281

• Transcript: Ll_transcript_478867
• CDS coordinates: 34-1779 (+)
• Peptide sequence: MMILTRSSASFLQNPQIRFFNHSLLNPTSPSSLFKSLSFFSLSITQTRTNFSTTPNNVVPTSQDSNGKDTFFAEESVFWNSLGLSDTISRSLSNIGLNRPSLVQASSVPAVLSGKDVIIAAETGSGKTYSYLVPLIDKLLGTHESSLQTVSDQEVSSTRKVLLVLCPNVQLCEQVVRMASSLCGDNGEPIVSVAAICGRQGWPHREPDIIVTTPAALLNYVDTDRDRRLEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLVSQAKESAAELPQELESSLSSHDALEVEEEIENEAISEEDDDDDNEEIPDINNEVESVKRRDWRRVRKTYERSKQYIFVAATLPVNGKKTAGGILKHMFPDAKWVSGNYLHCHNPRLEQRWIEVTVDTQVDELIRAVKWGFRAEDLDSAGGIHRTMVFANTVEAVEAVAKLLHHSGIECLRYHKGCTLEERAQTLVDFHEKGGVLVCTDAAARGVDVPNVLHVVQADFATCAVDFLHRVGRTARAGQFGVVTSMYTESNRDLVDAVRRAGKLGQPVETAFSRKRGFRNKLKKRAAANKVRDSATIEEYSSIRV*
• ORF Type: complete

Annotations of Ll_transcript_478867

• Blastp: DEAD-box ATP-dependent RNA helicase 22 from Arabidopsis with 60.12% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 22 from Oryza sativa with 57.91% of identity
• Eggnog: ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1 5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4 U6 base-pairing interaction in the U4 U6 U5 snRNP, facilitating the first covalent step of splicing(ENOG410XNVG)
• Kegg: Link to kegg annotations (AT1G59990)
• CantataDB: Link to cantataDB annotations (CNT0001390)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439193.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;