Transcript | Ll_transcript_4696 |
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CDS coordinates | 218-1867 (+) |
Peptide sequence | MAKGDDTLQKKKNKAIRKRNNRSSSALSVKVSAAIAAKKRRKAGKRRLCQGMCYSLPTPEDPFNDRHGKEDFKTKGPKNKTLPKKDETVPLIEKDASRRKGSHDVKISKKSYHLEKENESDKATDNLGKESIITSESENTEETETEDDLCGAQQNHREISEFPSKFVFWCLSSIENALREGDAYTDGEGNSLFANSWGLEFSKCYATGKDVMETSGNSATNEQIAWVVSGAADTFVGKELQGVSFSSPFLIFLVPSQEKATQVRKVCKPLKSIGIHTVSIHPGASLDHQIHGLKSCEPEFLVSTPERLLELVSLKAIDISAVSMLVVDGLNAICSAGHSDTLKSIKKFISGNPRLLVFNDCFSHTYIAMVQNLLTGPICRLSLNNSITSLSSCIIQSVEVCTSEDKLVKGIQAKHPFWSSGIHNSKLLYILRNEVKCDKLVKYLKSKGCSISLDSESVDSNSRVSVVYLEHISTTDIGVYDVVVLPSFVPSMDSYVHILTKMARGSVNGVLHSSLTKRDTELAEPLVEILEQCGQKVPPTLKDLQNTSK* |
ORF Type | complete |
Blastp | Pre-mRNA-processing ATP-dependent RNA helicase prp5 from Sclerotinia with 24.76% of identity |
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Blastx | DEAD-box ATP-dependent RNA helicase 14 from Oryza sativa with 24.15% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SS1G_06839) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449808.1) |
Pfam | DEAD/DEAH box helicase (PF00270.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer