Transcript | Ll_transcript_271108 |
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CDS coordinates | 224-5395 (+) |
Peptide sequence | MGASDPSNVPIINVEDEVVGEIVGTTDYFFSKIGDTVPLKSNGSIFEFETLPSHPLALSQRLRLIFVAHTSGFFVVRTKDVIDSAKQFKDKGTGSSVEELSLVDVSIGRVHILALSTDNSLLAASVSGQIQFYLVDSFANKEVKQSFSCSLSDDSAFVKDMRWITTLENSFVVLSNTGQLYYGEAGLPLKSVMDSVEAVDWGVKGEFVAVARKNNVLSILSAKKFEEWVSISLSFESWIGDSDENRSVKVDSVKCIRSDSIVVGCFQLDEDGKEENYLVQVIRSRSGEITRGCSDFVVQSFCDMYQGLFDDIVPFGSGPYLLLSYIEQCQLAINANIKNTDQHIMLLGWSVDDDHKNEPVVVDIERDNLVPRIELQENGDDNLLLGLCVDNVSIYEKVGVQLGVGEERTELSPYCVLICLTLEGKLAMFHVASQAGSEVSQPEVVSALRDEEDASIKPPVDKGSTFSHESQKQELDQASEESGSLKSKTLANPNQITHGEDFTKHREVDSVASIQSLKSNVKQMIPDVDLNKQTDHRNSFTSGEQQTNTGHKTKPLGSSTGSSSFNSNSAARGFSSYVNSQGTTEVTKVQHDTDSSRDTERASHLFPGTTQIHNAIDSHRTSHLFPGTTNVRDANDTQRTSHPFSGTTNVHTANVFGSVGGKSILSHNASGVSPAINSATRPVQRGGQLNPTGAVNTQPVSVTSSPLSSDANSTAGKSSIRKFHPSNEQHGASSKLGISSSDLSKQFVNINEMTNELDLLLRSIEEAGGFRDACTRSLRSSMEAVEQGMDALSKNCKIQACQVDEHLKEVQYLLNKTIQVVARKIYMEGIYIQASDSQYWDLWNRQKLNSELELKRQHILSLNQDLTYQLIELERHFNALELNKFSQNAGNRTGHGAFRSRYGPSKNIQSLHSLHNAISSQLVAAENLSECLSKQMSSLSLRSLSEKQKNVKELFETIGIPYDASFGTPDMKGSMRTSSSKNLLFSDFSANNDKYKKIQGSAMKNCESEMARRRRDSLDRSWTCFEPPKTTIKRKLLQQELQKPNWNGSPFSVNKEKVKTSMLKESAPRQADAEFPSIVFPASKMNVGTLDSHFEHEEASERSKPFLSDNFLAPTQVSESKSHVSQRSNISAFPSWSASQLSPAIVHRHPTEAKDFNAEKLNVVQKLDSTSNSENKSVLHTKIPPNSSISTYSNPGTPSPFKSSEVPIKNSKMTMATSSTVGNILPNVFTPESSRKHDFLTSTISSPSTLFGKTELVVDRSQPKANISAHPTFGGLFDSPSFPTIKTSSAASPLSSSVSSATLPSTAVSVALSRGMTSSNPSIDLTSETLKSEIQPAAVSNLKTDLGAASEVVTQPNEPLNGKAELKLGSSGKSSPKDEKSSNNTTTSALNVVRDSQSEKPSEAPMQFSNSFLAPASVSSGKNGGLDFGIPDQDEMEEEAPETSNTTELNLGSLGRFGIGSTPNPSLPKSNPFGGSFSNVATSSSSPTISFSVPGGELFRPASFSFPSSQPSAPAQSTNSGAFSGGFGAGATVPASNPPSAFGKPAQIGSGQQVLGSVLGSFGQSRQLGSGLPGSGFAAPSGFGGGFAGSGSPSGFPSAATGGGFAGIASTGGGFAGIASAGGGFAAAAASASTGSGFAGISSAGGGFGGAAPTAGGFGALSSGGGGFAGAASGGGGGFAGAASGGGGGGFGAFGSQQGNGGFSAFGATGGSKPPELFTQMRK* |
ORF Type | complete |
Blastp | Nuclear pore complex protein NUP214 from Arabidopsis with 41.84% of identity |
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Blastx | Nuclear pore complex protein NUP214 from Arabidopsis with 46.68% of identity |
Eggnog | NA(ENOG411262D) |
Kegg | Link to kegg annotations (AT1G55540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461878.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer