Transcript | Ll_transcript_28059 |
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CDS coordinates | 1-2274 (+) |
Peptide sequence | VAVSSNRRKRKTPTMVVSSLVSSSYTSTSIFHVLPSNSDPPYKLLQNHPSLNLLSQCNSINTFKQIHSHFIKTGLHNTLFAQSKLIQFCALSPFGDLSYALSLFHSIPQQQQQLNHFIWNTIIRGHYLTLSPISSLETYTRMLESGVVPNSYTFPFLFKSCAKTKATHEGKQLHAHVLKLGLHSDAHVHTSVITMYARVGELADARLVFDKSTLRDAVSFTALISGYVSMGYVDDARQLFDEIPTKDVVSWNAMVAGYVQSSRFEEALACFKEMQKANVPPNQSTMVTVLSACGHSGELELGNWISSWVRDHGLGSNIQITNALIDMYSKCGKVEKARQLFDGVKDKDVISWNTMISGYSYKGFYEEALALFDLMLRSNISPNDVTFLSVLPACACLGALELGKWVHAYIDKNLKSTSNASLWTSLIDMYAKCGCIEVAEQVFRSMDCRSLAACNAMISGYAMHGHAERAFGLFWEMVNEGFQPDDITFVGVLSACTQASLIDLGHQYFNSMIQDFRISPKLQHYGCMIDLLARAEKFEEAKILMRNMEMESDGAIWGSLLSACRVHGNVEFGEYAAERLFQLEPENPGAFVLLSNIYAGAGRWDDVARIRTKLNDKGVKKVPGCTSIEVDGVVHEFLVGDKFHQQNENIYRMLNEVDKVLEEAGFVPDTSEVLYDMDEEWKEGALAQHSEKLAIAFGLISTKPGTTIRIVKNLRVCGNCHAATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW* |
ORF Type | 5prime_partial |
Blastp | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic from Arabidopsis with 61.67% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic from Arabidopsis with 62.14% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT1G08070) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439867.1) |
Pfam | PPR repeat (PF12854.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer