Transcript | Ll_transcript_274976 |
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CDS coordinates | 2-2218 (+) |
Peptide sequence | SLTHSPFSLLSACNWGWFLCIFSPEMTNRGKGKGKEVAGKGSSGKRKITADNDKTGGGKRRNRGVVQFFEESADVDDFEDSSDDSDFSDDYFGDEEFETLSTMNNEPAKGQSSSFPFIPKEEEIDEEEFDRMMEARYGEASTFIRFAGDDIDDKGIDPNSFGGKEFVPTIWKVKCMVGRERISAFCLMQKFADLKLLGTKLEIISAFAVDHMKGFVYIEAERQCDINQACNGITGIYVTRVQPVPRNEVFHLFSVRPRSNEIAVGTWARVKSGHYKGDIAQVVAVNNTIKKVTVKLIPRIDLQALAAKFGGGYSRQKTAAVPAPRLISSSELEEFRPLIQIRRDRDTGKVFEVLDGMLLKDGYVYKKVSPDSLNLWGVEPTEEELLKFVPSENNESKDLDWLSQLYGDSKKKRVIRDDKGGGKGESSSGSAAANGFELYDLVCFGKKDFGLIVGMDKDDGYKILKEGPDGPLSVNVQRRDIKCGLVDLKLSAQDQHNKTILVNDSVRVLEGPSKDKEGIVRHIYRGIIFVYNESEEDNGGYFTSKSKMCEKVKLTVGDFSGKDSEPGPLVFEDMPTSPRSPLSPKKPWQARENNREFNRGDQDGLFTIGQTLRIRIGPLKGYLCRVIALRRTDVTVKLDSQQKVLTVKCEHLSEVQGKGTAVSTRGDPDPSSSKPFDLLGTDGNSGGWMDGAGTSTGGGGWNAGGTSTGGGGWNAGGTSTGGGGWNAAGTSTEGYVLQ* |
ORF Type | 5prime_partial |
Blastp | Protein RNA-directed DNA methylation 3 from Arabidopsis with 51.9% of identity |
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Blastx | Protein RNA-directed DNA methylation 3 from Arabidopsis with 52.85% of identity |
Eggnog | Transcription elongation factor(COG5164) |
Kegg | Link to kegg annotations (AT5G04290) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441366.1) |
Pfam | Early transcription elongation factor of RNA pol II, NGN section (PF03439.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer