Protein coding transcript 139412

TranscriptLl_transcript_232904
CDS coordinates102-6500 (+)
Peptide sequenceMATSIASQLQAIRSLVQSDSHSLKRPFSRPSILFDPKEAADIDLQSIFNIALEGLEVLISADERFRNYKNDLFSHRSKELDRELMGIEQNNQLNSSIASYLKLLSGYFHLPSALKTIEYLIRRHKVHVYNTEELILCALPFHDTHEFVRIVQILDTRNNTKWGFLDGVKVSGAPPPRTVIVQQCIRDKGILEVLSNYASPSKKFQPSRHVIGFCTAVFVEVLGSSVTVNDDVVKRILPYVVSGLQSGIKGISDHKAGSLMIVGLLGNRAALAPKLLNSLIRSVAEVAREEAKELTDLQWFRLSIIALINLVQSQNVDILPTKALEILKEIRDLAEVLLELSREFNIEKFLLVLLDSLINCSSSDEYCQRALLSIIEKVPISGSVYHVVTKILSTCVKLSQKTGDSASSVSAGWAKKIMIIVNTKYPSALRGAVQHFLQDNKAHSMKDDKLYKVLCKMLDGNLDSSHGISDSKIWFALHHPKADVRRATLLDLNSSGMLKTKAVASESLIDIEEAILRQLDDKDLTVVQAALSIDGLQNAIDSSKLLDALQKVLRKCFGMLVSGSTENISLTVNVCVICLKNAISYFHDLSGYLNKVASMIFPLLLVLLQTQHLNLKALGLVEKINWPLYQNIAVSSPGELTSIPGSLSSINLRTINNMAENFMVQPEDHIAWFVDNCSDLELSKTLFFFVVLQSLLIKPKGDDFSALFESVFPILKAEWKSLVTAGDVPLEEFNSEMLDWDCSAFFDHLSVASLGPLNTKLLVCIFWRLLSALISVVPSDIILDDDNKWVSRIKDLFVFFATSQFKNSFNEHLHYLAAHCKISPARLLSKFFTGEGVPVAVQVESLQCYTFLCSLSQDRWQIELLAEFPSVLVPLAGDNQTIRIAAMNCIDGLHALWCRIEPPGKKNGSNFLGECNFLGELLRLMDEQKTLILSDRKFLPSLFASMLSLSCHNILVPQNIENRFDQPAKEKILGFILRSVPKFSNYGKLMILSLLKGIGSVIMHVKEYCDVLDTSCQKLSKTEIQIKCLLLESCVMSYSSGGNDLQGHLLKALQLDATTSDDPAYVEPCITVLNKLHNEFYKGLKNEVKELLFCELVFLCRNANGAIQSATRDAIMRIDIDFSTVGHMLDLIIKHENFVGSSMYEKTAKKQKLTVNQDADLPPSDICGGVDPVYVISSLLDVLLLKKDITSRDLLLGPLFKLLSTVFSKEWVNNALSLETTLSQPLSSSSEAHTAIICHIQQTLLIILEDIVRSFKSIAPLKGKIANVIDIKLLIECARTSNDVATRNHVFSLLATVTRVLPEEVLGHILDIIEIIGQSAVIQIDTHSKHVFEDLISAIVPCWLSKTDDVEKLLKIFVDILPEIVEHRRLSIVLYLLRTLGEGKSLASLLSLLLSSLVSRKATSFLNSETTDALAFYTREWEFNFAVQICEQYTSINWLPALVAVFEQNGISNIGQGQFLELFLAMQLTLQKFQEPEFVLKLESGEDTDVIQRALGQLMEQIVFLLHVVDARKKQLNLPVIVRKELKEIMRAVVRNITLVMTPSAYFKSIINLLQHADKNVGKKALGLLCETARSHKNVSLKLKDKKGSRSNPSFSWLHMNESSQESLNNMCLEIIRVLDDSSDVSLKVAAVSALEILADRFSSNSSIFSVCLGPVTRCITSNIPVVTSSCLRATAALVNVLGPKALAELPQIMDSVMKSSRQVLSKSDTKPKTNEVLSASNESHLFSVLITLEAVVDKLGGFLNPYLTNIMELLVLHPEYVSGIDAKLESRAHGVRKLLAEKIPVRLVLPPLLKLYSAAIEAGDNSLTIVFDMLATLVGTMDRSSIVAFHAKVFEFCLVALDLRFQSPPSVQNIDAVEKNVINAMVALTLKLTESMFKPLFVKSIEWAESEVDETASAGNVDRAISFYAMVNKLAESHRSLFVPYFKHLLGNCVHHLDDGGDVKASGLNRKKKKAKTQEGDSVSIKSWHLRTLVLSSLHKCFLYDTGNLKFLDSSNFQVLLKPTVSQLIVDPPASLEDSTNIPSVKEVDDLLVVSIGQMAVTAGSDLLWKPLNHEVLMHTRSEKLRPRILGLRIVKYLVENLKEEYLVLLAETIPFLGELLEDVDLSVKTLAQEILQEMESMSGESLRQYL*
ORF Typecomplete

Annotations of Ll_transcript_232904

BlastpUncharacterized protein At3g06530 from Arabidopsis with 46.64% of identity
BlastxUncharacterized protein At3g06530 from Arabidopsis with 46.57% of identity
EggnogU3 small nucleolar RNA-associated protein 10(ENOG410XNQQ)
KeggLink to kegg annotations (AT3G06530)
CantataDBLink to cantataDB annotations (CNT0001374)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019435540.1)
PfamU3 small nucleolar RNA-associated protein 10 (PF12397.7)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer