miRNA 141 details

Id Micro141
SequenceGAATGACGTCCGGTCTGAAGA 
Annotated namesosa-miR166j-5p; 
Annotated pre-miRNANone

Targets of miRNA 141

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_269658; FTRINITY_DN63619_c0_g1_i1 139 159 ACGTTAAACCGGACGTCGTTC BLAST psRNATarget
Ll_transcript_207704; FTRINITY_DN52699_c0_g3_i1 180 200 GTTTGAGGCTGGACGTTATTT BLAST psRNATarget
Ll_transcript_73949; FTRINITY_DN91784_c0_g1_i1 49 70 AGTTCAGACCGGACGTCCGTTC BLAST psRNATarget
Ll_transcript_209394; FTRINITY_DN49217_c0_g1_i1 205 225 CCATCAGACCGGATGTTGTTA BLAST psRNATarget
Ll_transcript_143534; FTRINITY_DN51982_c0_g1_i5 2509 2529 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143532; FTRINITY_DN51982_c0_g1_i3 2611 2631 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143533; FTRINITY_DN51982_c0_g1_i4 3220 3240 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143530; FTRINITY_DN51982_c0_g1_i1 3017 3037 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143536; FTRINITY_DN51982_c0_g1_i7 3036 3056 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143535; FTRINITY_DN51982_c0_g1_i6 3119 3139 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143540; FTRINITY_DN51982_c0_g1_i10 3138 3158 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143542; FTRINITY_DN51982_c0_g1_i12 3728 3748 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_143538; FTRINITY_DN51982_c0_g1_i8 3747 3767 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_261937; FTRINITY_DN51241_c0_g1_i2 937 957 TATTCAGATTGGATATCATTT BLAST psRNATarget
Ll_transcript_258003; FTRINITY_DN57967_c0_g1_i28 1216 1236 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_258001; FTRINITY_DN57967_c0_g1_i26 1186 1206 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_258006; FTRINITY_DN57967_c0_g1_i31 1186 1206 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_258010; FTRINITY_DN57967_c0_g1_i35 1272 1292 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_205532; FTRINITY_DN56999_c2_g1_i1 2243 2263 GGTTCAGACTGGAATTCATTC BLAST psRNATarget
Ll_transcript_205536; FTRINITY_DN56999_c2_g1_i2 2440 2460 GGTTCAGACTGGAATTCATTC BLAST psRNATarget
Ll_transcript_205533; FTRINITY_DN56999_c2_g2_i1 2227 2247 GGTTCAGACTGGACTTCATGC BLAST psRNATarget
Ll_transcript_205535; FTRINITY_DN56999_c2_g2_i3 2228 2248 GGTTCAGACTGGACTTCATGC BLAST psRNATarget
Ll_transcript_258007; FTRINITY_DN57967_c0_g1_i32 2019 2039 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_205539; FTRINITY_DN56999_c2_g1_i3 3007 3027 GGTTCAGACTGGAATTCATTC BLAST psRNATarget
Ll_transcript_258012; FTRINITY_DN57967_c0_g1_i37 2125 2145 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_205534; FTRINITY_DN56999_c2_g2_i2 2647 2667 GGTTCAGACTGGACTTCATGC BLAST psRNATarget
Ll_transcript_257993; FTRINITY_DN57967_c0_g1_i18 2198 2218 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_257994; FTRINITY_DN57967_c0_g1_i19 2304 2324 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_205538; FTRINITY_DN56999_c2_g2_i5 3036 3056 GGTTCAGACTGGACTTCATGC BLAST psRNATarget
Ll_transcript_205537; FTRINITY_DN56999_c2_g2_i4 3090 3110 GGTTCAGACTGGACTTCATGC BLAST psRNATarget
Ll_transcript_117972; FTRINITY_DN73039_c0_g1_i1 105 125 CCGTCAAACCGGACATCATTC BLAST psRNATarget
Ll_transcript_183353; FTRINITY_DN84252_c0_g1_i1 157 177 ATTTGATACCGGAAGTCATTC BLAST psRNATarget
Ll_transcript_318971; TRINITY_DN46280_c0_g1_i16 2958 2978 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_318968; TRINITY_DN46280_c0_g1_i13 2977 2997 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_318956; TRINITY_DN46280_c0_g1_i1 2991 3011 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_318965; TRINITY_DN46280_c0_g1_i10 3010 3030 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_318962; TRINITY_DN46280_c0_g1_i7 3612 3632 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_318969; TRINITY_DN46280_c0_g1_i14 3631 3651 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_318970; TRINITY_DN46280_c0_g1_i15 3645 3665 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_318963; TRINITY_DN46280_c0_g1_i8 3664 3684 ACTTAAGATTGGACTTCATTC BLAST psRNATarget
Ll_transcript_430870; TRINITY_DN52124_c0_g1_i2 953 973 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_430889; TRINITY_DN52124_c0_g1_i20 1059 1079 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_430898; TRINITY_DN52124_c0_g1_i29 953 973 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_430875; TRINITY_DN52124_c0_g1_i6 1059 1079 AGTTCAGACTGGACGTGCTTC BLAST psRNATarget
Ll_transcript_515561; TRINITY_DN50856_c4_g4_i1 1580 1600 GGTTCAGACTGGACTTCATGC BLAST psRNATarget
Ll_transcript_515565; TRINITY_DN50856_c4_g2_i2 2255 2275 GGTTCAGACTGGAATTCATTC BLAST psRNATarget
Ll_transcript_515559; TRINITY_DN50856_c4_g2_i1 2273 2293 GGTTCAGACTGGAATTCATTC BLAST psRNATarget

Expression of miRNA 141


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)