Transcript | Ll_transcript_206039 |
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CDS coordinates | 109-2868 (+) |
Peptide sequence | MSMFKTTLRFWYINFSPHPILQRFFQTSSLVSTSHNFIKLPIHYSNLLSQCAASKSLISGMELHAHLIKFGFFNDPSLMNHLVTMYSKSRHFGYARKLVDHCTEPDLVVSWSALISGYVQSGLVEEALLAFSDMSMLGVKCNEYTFPCVLKACSIKKDLNMGKKIHGMTLVTGFDSDGFVSNALVVMYSKCGQLGESRKLFGANVERNVVSWNALLSCYLQSDFHVEALNLFTEMVQSGMRPNEFSLSIILNACAGLRDGGLGRMVHGILLKLGHDLDQFSVNALVDMYSKGGEIDDAVAVFREITHPDIVSWNAIIAGCVLHDRNDLALMLLDEMKISGTCPNMFTLSSALKACAAMRSKQLGRQLHSSLIKMDTHSDLFVEVGLVDMYSKCEMMDDARRAFGLMRNKDIIAWNALISGYSDCGDDLEAVSLFSEMYNEDVDFNQITLSTVLKSVAGLQAIKVCKQIHTVSIKSGIYSDFYVINSLLDTYGKCSDIDGASKIFEERTWEDLVAYTSMITAYFQYGDGEEALKLYLQMQDADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDAGCAFSEIPTRGIVSWSAMIGGLAQHGHGKVALQLFNQMINDGVQPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHYACMIDLLGRSGKLNEAMELVNSIPFEANGSVWGALLGAARIHKNIELGQKAAEMLFALEPEKSGTHVLLSNIYASAGMWENVSKVRKLMKDSNVKKEPGMSWLEIKDKVYTFIVGDRSHSRSDEIYAKLDQLSGLLSKAGYTPLIEMDIHNVNQSEKEQLLYHHSEKLAVAFALIATPPGAPIRVKKNLRVCVDCHAFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW* |
ORF Type | complete |
Blastp | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic from Arabidopsis with 38.44% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic from Arabidopsis with 38.44% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT3G57430) |
CantataDB | Link to cantataDB annotations (CNT0002198) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453668.1) |
Pfam | PPR repeat family (PF13041.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer