Transcript | Ll_transcript_262116 |
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CDS coordinates | 402-3110 (+) |
Peptide sequence | MADPHGTNSSGNRDSDLLQLSLPAIASLKKGAYLLKYGRRGKPKFCPFRLSNDESLLIWFHGKEEKQLKLSTVSMIIPGQRTAIFRRYPQPEKEYQSFSLIYNDRSLDVICKDKDEAEIWFVGLKALVTRCNNHRRGNEARFASVLSDSPQISPQRYTPSVKPVVCIYGFLLLLPCFIKFRCLKVAMILTLFNTQPQDPGDTIGFSFDNSSHNTPGKPFSETISYTAAGKSSSQAESIANASLPPGSVNNSNLNSSPEPFRESVSSAVSSLTSLSQGSYQEDFDALSDVYIWGEDIGNGVLGGGVHRVESLSNSEMDALIPKALKSKVVLDVYSIACGSKHAVVVTKQGEIFSWGYESGGRLGLGVEADVSHPKPIDTLSSVNIEVVACGDYHTCAITFAGDLYTWGDGTHNSGLLGNGNEVSHWIPKKVSGNMEGLRISYVSCGPWHTAVVTSAGQLFTFGDGTFGALGHGDTSSTNIPREVETLKGLRTTKVSCGVWHTAAVVEMINEPVESSTHSPGGKLFTWGDGDKSQLGHGDREPRLVPECVIALDNENICRVACGDTLTVALTTSGYVYTMGSAAYGQLGCPAADGKVPTRVEDIIVDSFVEDIACGSYHVAVLTSKTEIYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVFCGSNFTAVVCLHKWIPSVDHSVCSGCRNPFGFRRKRHNCYNCGLVFCKACTSRKSMKAALAPNSNKLYRVCDDCYSKLKKSADSVSSRQSVSLRSASVQDGKVSKLQGSLLRLSSFGSITQAESSHSKLPESHDSHLFPSLNGKLQVGGFAPSKSSNSVSEESRKLLSVSVPAPIISCHPSSPGSSKSSPRKSCEDINDDSKQRNEILSQEVITLRAQVNLVIRYILFICAPFYNTFA* |
ORF Type | complete |
Blastp | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 51.01% of identity |
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Blastx | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 50.39% of identity |
Eggnog | regulator of chromosome condensation(COG5184) |
Kegg | Link to kegg annotations (AT1G76950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454817.1) |
Pfam | Regulator of chromosome condensation (RCC1) repeat (PF13540.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer