Transcript | Ll_transcript_12174 |
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CDS coordinates | 229-2328 (+) |
Peptide sequence | MKRSNHFVKLLESCCSKISVEQLHSQCLKVGLAHDSFIATKLNVLYARYASISHAYKLFEGTPIKSVHLWNALLRSYCSKGEWIETLRLFCRMNAAAISTEERPDNYTVLVALKACAGLQRLELGRMIHGFLKKKMDNDMFVGSALIDVYSKCSQMNDACNVFMEYPKPDVVLWTSMVSGYEQSGSPELALAFFSQMVAADYAILDPVTLVSAASACAGLSDSKRGRSIHGFVKRKGFDTKLCLANSMLNLYGKIGSVKSAVNLFREMPNKDIVSWSSMVACYADNGDETNALDLFNEMIDTGIEPNRVTVISALRACASTSNLEEGTKIHKLAVNHGFELDTAVSTALMDMYLKCCSPENALGLFNRMPKKDVVSWAVLFSGYAEIGMAHKSMGVFCSMLSNGTQPDAIALLKILTASSELGILQQALCLHAFVTKTGFDNNIFIGSSLIELYAKCCSIDKANKVFKETTHKDVVTWSSIIAAYGFHGRGQEALKLFYQMINRSNVKPNSVTFLSILSACSHAGMIKEGIKIFNTMVNTYEMKPNVDHYGIMVDLLGRVGELDRALDLINHMPMKAGPHVWGALLGACRIHQNKKIGEVAAKNLFTLNHNHAGYYILLSNIYCVDKNWHNAAKLRALIKDNRLKKIVGQSMVELRNGVHSFVACDRFHECDHVYEMLRKLDSNMREGYAPQVLIEGIL* |
ORF Type | complete |
Blastp | Putative pentatricopeptide repeat-containing protein At3g01580 from Arabidopsis with 50% of identity |
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Blastx | Putative pentatricopeptide repeat-containing protein At3g01580 from Arabidopsis with 50% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT3G01580) |
CantataDB | Link to cantataDB annotations (CNT0000617) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448811.1) |
Pfam | PPR repeat (PF01535.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer