Transcript | Ll_transcript_186816 |
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CDS coordinates | 1-2514 (+) |
Peptide sequence | RAQRLHQSQELEGQPVEMDTVSIIATFPSEIREEVLLTSSDAVLANLTPALVAEANMLRERFAHRYSRNLFGMNSRSRRGETSRREAIIGLDGAGGSISSRRSGGAKVVEADGAPLVDTEALHAMIRLFRIVQPLYKGQLQRLLLNLCAHSETRTSLVKILMDLIMLDVRKPSSYFSKIEPPYRLYGCQNNVMYSRPQSFDGVPPLLSRRILETLTYLARNHPYVAKNLLQFRLHHPASREPDNADVARGKAVMVVEDEGNTGGSNAGCVSITILLSLLKHPLYLRSIAHLEQLLNLLDAIIDSAGSKSSSSDKSQISTEPESVPETPVMEAAINTDYVVISSGLDASPKVDDSSKPTSSGNRESETEQVLSNLPQAELRLLCSLLALEGLSDNAYVIVAEVMKKLVAIAPTHCQLFVTELAAAVQKLTSSAKDELHVFSETIEALLSTTSSDGAAILRVLQALSSLLTSSTEKKCDGKIPDLSEVWEINSALEPLWLELSYCISKIESYSESASELLTPSRTLVSKPSGATPPLPAGSQNILPYIESFFVVCEKLHPAQSGATHGSRVPVNSDVEEASTSATQQKTSGPAVNVDEKHAAFVKFSEKHRKLLNTFIRQNPGLLEKSFSLMLKVPRFIDFDNKRSHFRSKIKHQHDHHHGPLRISVRRAYVLEDSYNQLRMRPTQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNELTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGAKVTYHDIEAIDPDYFKNLKWMLENDITDVLDLTFSIDADEEKLILYERTEVLTLF* |
ORF Type | 5prime_partial |
Blastp | E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 51.28% of identity |
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Blastx | E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 50.7% of identity |
Eggnog | ubiquitin protein ligase(COG5021) |
Kegg | Link to kegg annotations (AT1G70320) |
CantataDB | Link to cantataDB annotations (CNT0001834) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416613.1) |
Pfam | HECT-domain (ubiquitin-transferase) (PF00632.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer