Transcript | Ll_transcript_144525 |
---|---|
CDS coordinates | 109-1968 (+) |
Peptide sequence | MSSQFWKPGTEKPRILEDEEGSVIFLSNSLSSSSYSEKQRQRLPVFKYRNAILYLVETHGTTIIVGETGSGKSTQIPQYLIEAGWGHGGRLIGCTQPRRLAVQAVASRVAQEMGVQLGEEVGYTIRFEDVTKSDVTVLKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIIASATIEAKSMSDFFRTRKKRREPENEDSRLQLEPAILSVEGRSFNVQINYAEEPVHDYVQAVVSTVLSIHERESTGDVLVFLTGQDDIDAAIHLLNEEVQNNGKRSSGLVLLPLYSGLPRAEQELVFSPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQRFYNPVSDIENLVVAPISRASARQRAGRAGRVRPGKCYRLYTEEYFLNEMPNDGIPEIQRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPVGFQVAEIPLDPMIAKMIIASNQFGCSEEIITIAAVLSIQSIWISGRGIQKESDEAKLRFAAAEGDHVTFLNVYKGFLQSSKSSQWCHKNYVNYQAMVCICFATFNWFSLSFFANSSRNGDLNCRERLLRLLEKQSLLAFLLMRAV* |
ORF Type | complete |
Blastp | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 78.18% of identity |
---|---|
Blastx | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 from Arabidopsis with 77.84% of identity |
Eggnog | helicase(COG1643) |
Kegg | Link to kegg annotations (AT4G18465) |
CantataDB | Link to cantataDB annotations (CNT0002241) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440201.1) |
Pfam | Helicase conserved C-terminal domain (PF00271.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer