Transcript | Ll_transcript_143540 |
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CDS coordinates | 1391-2377 (+) |
Peptide sequence | MDDIEKLVSKLEDKVRALEEGSCMDAIILPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSAGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRVYDDEFLDATVPEIQRSSLAGCVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGQKMAELPLEPSLSRTLMEANNYGCISEALTVAAMLSAETALLSAPGRSKTERKRKNPVTNLPDGSGLGDHIQLLQIYECWDQTDYDIGWCKDNGLQVRGMLFVKDVRKQLSQIMQKIAKVILSYGRCLKE* |
ORF Type | complete |
Blastp | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 80.86% of identity |
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Blastx | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 68.53% of identity |
Eggnog | helicase(COG1643) |
Kegg | Link to kegg annotations (AT1G27900) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460163.1) |
Pfam | Helicase conserved C-terminal domain (PF00271.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer