Protein coding transcript 147539

TranscriptLl_transcript_221261
CDS coordinates322-6456 (+)
Peptide sequenceMASKGPRYKIDHDTKAKRQKALEAPREPKRPKTHWDHVLEEMAWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKKMKEEEQRVRKVALSISKDVKKFWTKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDAYKPQKQNSPELQMRTEYKHVDGDITNEAKEVNVEEYPSDAPDNDEEYDVQSDDESVDDEQTLEEDEALITEEERKEELAALRDEIDLPIEELLKRYAGEKGEPERQESSPEHSKDAVQIIRADDGDENDDILSVSKVVSSNSSMSPGRRCDESNGDKATQASNLSQYEDHPPENPSEVPSEMANESIAYDFNDEEEDADFLLGTEDKDDETTLSEEEKLERVDAIDPRDEIALLHKESDMSVEELLARYKKDLGDNEKWEDDSDASSLSEDHRDPPVHEEAGAAVSVNENIKSGEHLAIVQSQAEEPWEAPPENSEKTESEYIIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKQNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGEEKVNKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVINCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMLGIDIQLSSSVCSILLPSTFSTVDLRGLGLLFTHLDYNMTSWESDEIQAIETPTSLIMERTNVGDLEVIKPGLKSQKKLQGTNIFEEIQRAIWEERLRQAKERAAAIAWWNSLRCKKRPIYSTSLRDLVSIKHPVYDIHQVKANPVSYLYSTKLADIVLSPVERFQKMTDVVESFMFSIPAARVPSPVCWCSRIETPVFLDSSYKQKCSEVLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPIELFSGHRTLSVKNIQKEKNQNNGEASVTNAEVEAALKDVEDEADYMAYKRVEQEEAVDNQEFTEEAIGRLEDDEYVNEDDMKDDEPVEFGESVPSLSKENLSMLNGNDPTEDRPPSVPNKEDDVDMIADVKQMAAAAAAAGQAITVFESELRPIDRYAIRFLELWDPIIDKTTLESEVRIEDTEWELDRLEKFKEEMEAEIDEDEEPLVYESWDADFATEAYRQQVEALAQHQLMEELEYEAKQKEKAEEENCDSKMTQTPSDSKPKSKKKPKKAKFKSLKKGSLTSGLRSAKQEPQADTMTIDDEDVNSLAFGTPESTSQKKRKILKPTTDGEEKRLKKSKKMKRKSPDICASDLDSNSLIVLDEHTESKLGESLVDFEQRMAGRSKMGGKISITPMPVKRILVIKPEKLKKGNLWSKDCIPSADFWLPQEDAILCAIVHEYGSNWNLVSETLHGMTAGGTFRGRYRHPVHCCERFRELFQKYVLHSTDNANHEKISNTGSGKALLKVTEDNIRMLLDVASEQPNRELLLQKHFFALLSSIWKVSAHVDRRQNPSPTCNGLYFDQSFFTSKCQQSQNSLKKPSERIMFTNLAQSKKLIAAALDDTISRSESDKILPANQGKEMPLSADKLDITLEFQKEESDVLSSFPSVINLSIDGIGASPSLNKQTGECDHLRGCLSAAENRFREVSKTCEEDSPGWASSAFSTNDSRSQPGSRIQSLGKQKTSISETSKHSKSKSKRVSMDPSDMQQAEPSLQSMPPHKELKFDLTTSTMDIVGIDDMDTNPPFGLHLENSFERESSEAVPHDYLDGLIFGLDDLIEFPEYTDIR*
ORF Typecomplete

Annotations of Ll_transcript_221261

BlastpProtein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 62.63% of identity
BlastxProtein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 69.15% of identity
Eggnogchromatin modification(ENOG410XP0A)
KeggLink to kegg annotations (AT3G12810)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019414895.1)
PfamHSA (PF07529.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer