miRNA 148 details

Id Micro148
SequenceGCAAGTTGACCTTGGCTCTGT 
Annotated namesaly-miR169d-3p; aly-miR169e-3p; aly-miR169g-3p; 
Annotated pre-miRNANone

Targets of miRNA 148

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_63918; FTRINITY_DN55388_c1_g1_i3 457 477 TGAGAGCTAAGGTCAGATTGC BLAST psRNATarget
Ll_transcript_123463; FTRINITY_DN53748_c0_g1_i7 1509 1529 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_123454; FTRINITY_DN53748_c0_g1_i2 1639 1659 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_123460; FTRINITY_DN53748_c0_g1_i5 1509 1529 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_123462; FTRINITY_DN53748_c0_g1_i6 1639 1659 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_123476; FTRINITY_DN53748_c0_g1_i13 1509 1529 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_123465; FTRINITY_DN53748_c0_g1_i8 1639 1659 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_93098; FTRINITY_DN54830_c0_g1_i12 541 561 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_42815; FTRINITY_DN54199_c6_g1_i9 557 577 TCAGAGCTAGGGTTAACTTCC BLAST psRNATarget
Ll_transcript_42810; FTRINITY_DN54199_c6_g1_i4 634 654 TCAGAGCTAGGGTTAACTTCC BLAST psRNATarget
Ll_transcript_42816; FTRINITY_DN54199_c6_g1_i10 765 785 TCAGAGCTAGGGTTAACTTCC BLAST psRNATarget
Ll_transcript_42818; FTRINITY_DN54199_c6_g1_i12 895 915 TCAGAGCTAGGGTTAACTTCC BLAST psRNATarget
Ll_transcript_132299; FTRINITY_DN57500_c0_g1_i1 797 817 CTAGAGACAACGTTAACTTGC BLAST psRNATarget
Ll_transcript_132300; FTRINITY_DN57500_c0_g1_i2 797 817 CTAGAGACAACGTTAACTTGC BLAST psRNATarget
Ll_transcript_46772; FTRINITY_DN65401_c0_g1_i1 50 70 GGAAAGTTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_106935; FTRINITY_DN52971_c2_g1_i1 408 428 CAAGGGCAAAGGTCAACTTTC BLAST psRNATarget
Ll_transcript_197326; FTRINITY_DN54354_c1_g2_i4 170 190 CAAGGGCAAAGGTCAACTTTC BLAST psRNATarget
Ll_transcript_231403; FTRINITY_DN52346_c3_g1_i5 533 553 GGAAAGCCAAGGTCAATTTCC BLAST psRNATarget
Ll_transcript_231386; FTRINITY_DN52346_c3_g1_i1 557 577 GGAAAGCCAAGGTCAATTTCC BLAST psRNATarget
Ll_transcript_231394; FTRINITY_DN52346_c3_g1_i2 1229 1249 GGAAAGCCAAGGTCAATTTCC BLAST psRNATarget
Ll_transcript_54580; FTRINITY_DN57260_c3_g2_i4 1013 1033 CCAGGGCCGAGGTTGATTTGA BLAST psRNATarget
Ll_transcript_54576; FTRINITY_DN57260_c3_g2_i3 1457 1477 CCAGGGCCGAGGTTGATTTGA BLAST psRNATarget
Ll_transcript_54591; FTRINITY_DN57260_c3_g2_i7 1764 1784 CCAGGGCCGAGGTTGATTTGA BLAST psRNATarget
Ll_transcript_54584; FTRINITY_DN57260_c3_g2_i6 2208 2228 CCAGGGCCGAGGTTGATTTGA BLAST psRNATarget
Ll_transcript_13923; FTRINITY_DN59253_c5_g4_i1 126 146 ATAGAGCGAAGGTCACCTTGA BLAST psRNATarget
Ll_transcript_237895; FTRINITY_DN54468_c0_g5_i1 240 260 TCAGAGCCAAGTTTGATTTGT BLAST psRNATarget
Ll_transcript_6413; FTRINITY_DN58575_c1_g6_i1 194 214 ATGGAGCGAAGGTCACCTTGT BLAST psRNATarget
Ll_transcript_43228; FTRINITY_DN54101_c8_g2_i3 76 96 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_43239; FTRINITY_DN54101_c8_g2_i9 76 96 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_43234; FTRINITY_DN54101_c8_g2_i6 76 96 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_43240; FTRINITY_DN54101_c8_g2_i10 76 96 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_123037; FTRINITY_DN53718_c2_g1_i14 1642 1662 GCAGATCCGAGCTCAATTTGC BLAST psRNATarget
Ll_transcript_203389; FTRINITY_DN56966_c0_g1_i1 1521 1541 ACGGATTAAAGGTTAACTTGC BLAST psRNATarget
Ll_transcript_203401; FTRINITY_DN56966_c0_g1_i4 1520 1540 ACGGATTAAAGGTTAACTTGC BLAST psRNATarget
Ll_transcript_203421; FTRINITY_DN56966_c0_g1_i11 1520 1540 ACGGATTAAAGGTTAACTTGC BLAST psRNATarget
Ll_transcript_203410; FTRINITY_DN56966_c0_g1_i7 1520 1540 ACGGATTAAAGGTTAACTTGC BLAST psRNATarget
Ll_transcript_47145; FTRINITY_DN6293_c0_g1_i1 263 283 CTAGAGCTGAAGTCAACTTGG BLAST psRNATarget
Ll_transcript_270039; FTRINITY_DN77446_c0_g1_i1 14 34 TCTGAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_81680; FTRINITY_DN70459_c0_g1_i1 104 124 TCAGAATCAGGGTTGATTTGC BLAST psRNATarget
Ll_transcript_130492; FTRINITY_DN57570_c0_g3_i3 492 512 TCAGAGACAGGGTCAGCCTGC BLAST psRNATarget
Ll_transcript_130499; FTRINITY_DN57570_c0_g3_i7 721 741 TCAGAGACAGGGTCAGCCTGC BLAST psRNATarget
Ll_transcript_123012; FTRINITY_DN53718_c2_g1_i1 1245 1265 TCAGATCCGAGCTCAATTTGC BLAST psRNATarget
Ll_transcript_123033; FTRINITY_DN53718_c2_g1_i12 1245 1265 TCAGATCCGAGCTCAATTTGC BLAST psRNATarget
Ll_transcript_130471; FTRINITY_DN57570_c0_g3_i1 1469 1489 TCAGAGACAGGGTCAGCCTGC BLAST psRNATarget
Ll_transcript_123026; FTRINITY_DN53718_c2_g1_i8 1875 1895 TCAGATCCGAGCTCAATTTGC BLAST psRNATarget
Ll_transcript_184274; FTRINITY_DN57499_c3_g1_i1 56 76 TTTGAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_122824; FTRINITY_DN53763_c0_g1_i3 443 463 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_122851; FTRINITY_DN53763_c0_g1_i19 2672 2692 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_329692; TRINITY_DN49014_c0_g1_i16 969 989 TGAGAGCTAAGGTCAGATTGC BLAST psRNATarget
Ll_transcript_329685; TRINITY_DN49014_c0_g1_i9 1125 1145 TGAGAGCTAAGGTCAGATTGC BLAST psRNATarget
Ll_transcript_329687; TRINITY_DN49014_c0_g1_i11 1241 1261 TGAGAGCTAAGGTCAGATTGC BLAST psRNATarget
Ll_transcript_505606; TRINITY_DN52554_c0_g2_i5 1448 1468 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_505598; TRINITY_DN52554_c0_g2_i2 1503 1523 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_505604; TRINITY_DN52554_c0_g2_i4 1503 1523 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_505609; TRINITY_DN52554_c0_g2_i7 1503 1523 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_505607; TRINITY_DN52554_c0_g2_i6 1503 1523 AGAAAGCTAAGGTCAGCTTGT BLAST psRNATarget
Ll_transcript_303128; TRINITY_DN48247_c0_g1_i11 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_303134; TRINITY_DN48247_c0_g1_i17 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_303119; TRINITY_DN48247_c0_g1_i3 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_303125; TRINITY_DN48247_c0_g1_i8 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_303118; TRINITY_DN48247_c0_g1_i2 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_303132; TRINITY_DN48247_c0_g1_i15 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_303133; TRINITY_DN48247_c0_g1_i16 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_303127; TRINITY_DN48247_c0_g1_i10 670 690 CGAGTTCTAAGGTCAACTTGC BLAST psRNATarget
Ll_transcript_472446; TRINITY_DN52089_c2_g3_i1 145 165 TCAGAGCTAGGGTTAACTTCC BLAST psRNATarget
Ll_transcript_424730; TRINITY_DN73843_c0_g1_i1 123 143 GCAGAACTAGGGTTAGCTTGC BLAST psRNATarget
Ll_transcript_329694; TRINITY_DN49014_c0_g4_i1 62 82 TGGGAGCTAAGGTCAGATTGC BLAST psRNATarget
Ll_transcript_371147; TRINITY_DN47079_c2_g1_i5 156 176 CTAGAGACAACGTTAACTTGC BLAST psRNATarget
Ll_transcript_371143; TRINITY_DN47079_c2_g1_i1 1071 1091 CTAGAGACAACGTTAACTTGC BLAST psRNATarget
Ll_transcript_371145; TRINITY_DN47079_c2_g1_i3 1339 1359 CTAGAGACAACGTTAACTTGC BLAST psRNATarget
Ll_transcript_476140; TRINITY_DN47488_c0_g1_i1 414 434 CAAGGGCAAAGGTCAACTTTC BLAST psRNATarget
Ll_transcript_437762; TRINITY_DN48924_c3_g2_i1 533 553 GGAAAGCCAAGGTCAATTTCC BLAST psRNATarget
Ll_transcript_437764; TRINITY_DN48924_c3_g2_i2 557 577 GGAAAGCCAAGGTCAATTTCC BLAST psRNATarget
Ll_transcript_437766; TRINITY_DN48924_c3_g2_i3 1229 1249 GGAAAGCCAAGGTCAATTTCC BLAST psRNATarget
Ll_transcript_499964; TRINITY_DN47357_c1_g3_i3 860 880 CCAGGGCCGAGGTTGATTTGA BLAST psRNATarget
Ll_transcript_499962; TRINITY_DN47357_c1_g3_i2 1004 1024 CCAGGGCCGAGGTTGATTTGA BLAST psRNATarget
Ll_transcript_518981; TRINITY_DN51287_c0_g1_i1 263 283 TCAGAGCCAAGTTTGATTTGT BLAST psRNATarget
Ll_transcript_427386; TRINITY_DN73178_c0_g1_i1 42 62 GCAGGACTAAGGTTAACTTGA BLAST psRNATarget
Ll_transcript_518983; TRINITY_DN51287_c0_g1_i2 1330 1350 TCAGAGCCAAGTTTGATTTGT BLAST psRNATarget
Ll_transcript_502270; TRINITY_DN47366_c3_g1_i4 80 100 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_502258; TRINITY_DN47366_c3_g1_i1 80 100 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_502260; TRINITY_DN47366_c3_g1_i3 80 100 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_502272; TRINITY_DN47366_c3_g1_i6 80 100 ATAAAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_335990; TRINITY_DN77078_c0_g1_i1 287 307 CTAGAGCTGAAGTCAACTTGG BLAST psRNATarget
Ll_transcript_451638; TRINITY_DN42778_c0_g1_i1 120 140 TCAGAATCAGGGTTGATTTGC BLAST psRNATarget
Ll_transcript_451640; TRINITY_DN42778_c0_g1_i3 157 177 TCAGAATCAGGGTTGATTTGC BLAST psRNATarget
Ll_transcript_451639; TRINITY_DN42778_c0_g1_i2 489 509 TCAGAATCAGGGTTGATTTGC BLAST psRNATarget
Ll_transcript_502255; TRINITY_DN47366_c2_g2_i2 87 107 TCTGAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_502254; TRINITY_DN47366_c2_g2_i1 87 107 TCTGAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_360907; TRINITY_DN47668_c2_g1_i4 1174 1194 TCAGAGACAGGGTCAGCCTGC BLAST psRNATarget
Ll_transcript_449920; TRINITY_DN50613_c2_g1_i8 1231 1251 TCAGATCCGAGCTCAATTTGC BLAST psRNATarget
Ll_transcript_449912; TRINITY_DN50613_c2_g1_i1 1242 1262 TCAGATCCGAGCTCAATTTGC BLAST psRNATarget
Ll_transcript_449926; TRINITY_DN50613_c2_g1_i12 1242 1262 TCAGATCCGAGCTCAATTTGC BLAST psRNATarget
Ll_transcript_502257; TRINITY_DN47366_c2_g1_i4 68 88 TTTGAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_502256; TRINITY_DN47366_c2_g1_i3 68 88 TTTGAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_502253; TRINITY_DN47366_c2_g1_i2 68 88 TTTGAGCCAAGGATGACTTGC BLAST psRNATarget
Ll_transcript_422477; TRINITY_DN47926_c0_g1_i5 71 91 CAAGAGTCGAAGTCGATTTGC BLAST psRNATarget
Ll_transcript_422479; TRINITY_DN47926_c0_g1_i6 71 91 CAAGAGTCGAAGTCGATTTGC BLAST psRNATarget
Ll_transcript_281855; TRINITY_DN46185_c2_g3_i12 2672 2692 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281851; TRINITY_DN46185_c2_g3_i10 2705 2725 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281842; TRINITY_DN46185_c2_g3_i5 2749 2769 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281889; TRINITY_DN46185_c2_g3_i28 2782 2802 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281847; TRINITY_DN46185_c2_g3_i7 2810 2830 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281872; TRINITY_DN46185_c2_g3_i19 2843 2863 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281878; TRINITY_DN46185_c2_g3_i23 3051 3071 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281884; TRINITY_DN46185_c2_g3_i26 3084 3104 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281837; TRINITY_DN46185_c2_g3_i1 3119 3139 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281876; TRINITY_DN46185_c2_g3_i22 3152 3172 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281869; TRINITY_DN46185_c2_g3_i17 3367 3387 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281885; TRINITY_DN46185_c2_g3_i27 3400 3420 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281870; TRINITY_DN46185_c2_g3_i18 3498 3518 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget
Ll_transcript_281881; TRINITY_DN46185_c2_g3_i24 3531 3551 CAAGAGTTAGGGTCAATTGGC BLAST psRNATarget

Expression of miRNA 148


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)