| Transcript | Ll_transcript_174376 |
|---|---|
| CDS coordinates | 74-7090 (+) |
| Peptide sequence | MLRKYGLLQHKRDTCIAEALNKTGLLSLPPIEPVKLQTEVDYARKLREMARFLEIIRNLQSRLRPIFQRADSGKESSLMSREMLQEESQLSALPSDLVSLEMLNQHDFPYPLPAPHSDNNENLTLVPVDSNSHLVSEEFHFTPSGGILEKKGLPVENPKEMMARWKVDKLDLKTVVKDALLSGRLPLAVLQLHLHQLEDFVVDKEPHDTFTAIRDIGRAVAYDLFLKGETDLAVATLQRLGENIESSLKQLLFGTVRRSLRALIANEMKRYEYLGPYEWKILEDMSMIESRYPSSSFWKTYHRRLKDTSVPSDSVSPLEIQLRLLHNHSFDGHVIECGEIDGIVLDSWMNINGSSCSTEVDEDDAHAGYWAAAAVWFDAWEQRTVDRMILDERLPSGIALLWESQLEYHIGRNNWKEVSTLLDVMPSYVLSTGSLQLNLDVLQPASSFGCNMKSSNFGSFFVSHEELDSVCMVIPDVQIYRFSPDVCSRWLRILLEEKLAKRFIFLKEYWEGTMEMIALLARSGFISGRDQILFEDIHVETSSNRDGAVQAMHKMLVQHCAQYNLPNLLGLYLDHYNLVLDQNSLYALQETAVGCQWARWLLLSRVKGCEYKASIANARSIMSNNLVPGNDLSVLELDEIIRTVDDIAEGGGEMAALATLMHAAAPIQSCLNSGGVNRHSNSSAQCTLENLRPSLQRFPTLWRTLVAACLGQDTLSLLVPKAKSVLSDYLSWRDDIFFSTGRDTSLLQMLPCWFPKPIRRLIQIYVQGPLGCQTLSGFPTGETLLHRDIDLFINADVHSDISALSWEATIQRHIQEELHGPLLEENGLGLEHHLHRGRALAAFNQILSHRIQSLKSEGEASTSAHGQTNTQSDVQRLLSPLGQSEETLLSSVLPIAIMHFEDSMLVASCAFLLELCGLSASMMHTDIAVLKRISSFYKSSENNENLRQLSPKGSVFHAMSHEGDVTESLARALADEYLHRDSPVIATETVAPSKRPSRALMLVLHHLEKSSLPQLVDGNTYGSWLLSGNGDGTELRSQRKAASQHWTLVTNFCRTHQLPLSTKYLAVLARDNDWIEFLSEAQIGGYSFDTVVQVASKEFSDPRFRLHMLTVLRGMQSKKKASSVSALDTLEKGDETNFPDENMCIPVEIFQILAECEKQKSPGEALLMKAKELSWSILAMVASCFSDVSSLSCLTVWLEITAARETSSIKVNDIASQIADNVGAAVNATNALPLSDRVLTFHYNRQSPKRRRLMTPISLDSSTSAISDIGSTSIGEKIFDSQDNTTDDKKRVENSGSIDIASDSGEGPASLSKMVAVLCEQQLFLPLLRAFEMFLPSCPLLPFIRALQAFSQMRLSEGSAHLGSFSARIKDEPIYLQANIGREGQIGTSWISSTASKAADAVLSTCPSPYEKRCLLQLLAATDFGDGGYAAAYYRRAYWKISLAEPLLRKDDELHLDNETLDDASLLSALEKNRHWEQARNWAKQLEASGSPWKSAIHHVTESQAESMVAEWKEFLWDVPEERVALWSHCHTLFIRYSFPSLQAGLFFLKHAEAVEKDLPARELHELLLLSLQWLSGMISLSNPVCPSHLLREIETKVWLLAVESETQVKNEGDFNFTFSTRENAVKNDSSIIDRAASIIAKMDNHINTMRNRSVEKYESRESNQIPHKNQVVDTGLSTTFAGGTKTKRRAKGYIASRRPPIESTDKNADTDDGSGTLGVKSELQIQEVNLKVEMSFSRWEERVGAAELERAVLSLLECGQIAAAKQLQHKFSPEKTPTEFRLVDAALKLAAISTPPGNVSTSMLDEEVHSVMQSYGVLNDKHHVDPLQVLESLVAIFTEGSGRGLCKRIIAVIKAANALGLLFFEAFNKQPIELLQLLSLKAQESFEEANFLVQTHPMSAASIAQILAESFLKGVLAAHRGGYMESQKEEGPAPLLWRFSDFLKWAELCPSEPEIGHALMRLVITGQEIPHACEVELLILSHHFYKSSACLDGVDVLVALATTRVDAYVLEGDFPCLARLITGVGNFYALNFILAILIENGQLDLLLQKYSAAADTNTGTAEAVRGFRMAVLTSLKHFNPNDLDAFAMVYNHFDMKHETAALLESRAEQSAEQWSRRYNKDHNEDLLDSMRYYIEAAEVHSSIDAGNKTRRDCAQASLLSLQIRMPDFQWLYRSETNARRALVEQSRFQEALIVAEAYNLNQPSEWSLVLWNQMLKPEVMEEFVAEFVAVLPLQPSMLIDLARFYRAEVAARGDQSHFSVWLTGGGLPADWAKYLGRSFRCLLKRTRDLRLRVQLATVATGFGDVTDACNEELDKVPDNAAPLVLRKGHGGAYLPLM* |
| ORF Type | complete |
| Blastp | Protein DDB_G0268328 from Dictyostelium with 24.92% of identity |
|---|---|
| Blastx | Protein DDB_G0268328 from Dictyostelium with 26.72% of identity |
| Eggnog | spastic paraplegia 11 (autosomal recessive)(ENOG410XR4T) |
| Kegg | Link to kegg annotations (DDB_G0268328) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462547.1) |
| Pfam | Spatacsin C-terminus (PF14649.5) |
| Rfam | - |
| GO | - |
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Alignmet by MSA Viewer