Transcript | Ll_transcript_29119 |
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CDS coordinates | 2-1519 (+) |
Peptide sequence | YLIHALAHNSCPHIDECKDVGAYDNIYRQLHLILSMLLQRNEDHKSEVTSNREKENISIITSIFHNIKHSEDIVDSSKSKNSHAMCDLGLAITKKIVQKDVDLQGLSASVSLPPILYKTHENNEADGTLVSGVKTWLADETVLTHFESLDLEMVPSQLAEDEVSKDNEIDGNEMPLGKMLKQIKSQRTSVKKLKKNKSVSAETEKDDQDIDNFNLVRQIKLNNHGLSYNSEPSNGHEHRSSKDALKDAENATGQKRKSRETKDIPVPKHWRSSCTNLILSSSASKASRRVPREDSPGNKLLLGSEFNPDLDSNATQINMVEGSDEDLLVSSLKQNVKGSGQYHNDETGQPDEHEMKSSDNLKLSDRTASHYSKSSIDSTKKYKRKSISGLAKCMTRGHEIDNEDLIGCRVKVWWPTDKKFYRGTLKSYDPLKGKHVILYDDGDVEILRLEKECWELVDKGHKSTKKIKPSSVKSSGKKCKASSGAQRKMTKKKCVLKNLRSLLHI* |
ORF Type | 5prime_partial |
Blastp | DNA mismatch repair protein MSH6 from Arabidopsis with 43.94% of identity |
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Blastx | DNA mismatch repair protein MSH6 from Arabidopsis with 47.27% of identity |
Eggnog | that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249) |
Kegg | Link to kegg annotations (AT4G02070) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463683.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer