Transcript | Ll_transcript_230954 |
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CDS coordinates | 1-2658 (+) |
Peptide sequence | TASHISELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEENLFRCEDDRFELDMLLESVSSAAKRAEELYNNIAENKINMESLGRVEDHFTALNVRCIERLYGDHGLDVVDILRKNPTHSLPVIITRLKQKQEEWTRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKQQEEDDILQSISAGNKQPLIPHLEFEYSDAGIHEDLYKLVRYSCEEVFSSKELLSKIMRLWDTFLEPMLGVPSQSCRTERVEDRKESHNACDGSPHRDSVSINSRLPKLNKNEADGRVTEVKNAHRTSLVANGKENVSVGGELVCRDDPMMDKGQKSVDCSVKVSGFSKPFASDEQVSKNNASIAVREENSLSRTNAELNAGCVTTPSRATDTDDSVAKCQSANAPLVEGCDTTAPVPVVNGVLTESSKVKSHEESAGPSKIEKEEGELSPNGDSEEDNFVGYENSNAQSMVKSKHNIEIRKYHSRNGEDESCPDGVGDNDADTDDEDSDDVSAVGEDASGSDSAGDEGSREDHEEEEDMEHDDVDAKAESEGEADGDAHSVGDGLSLPLSERFLSSVKPLTKHISAVSFVEEMKDSRVFYGNDNFYALFRLHQILYERILSAKTNSMSAETKWKTKDASSADPYSRFMNALYNLLDGSSENAKFEDECRAVIGNQSYVLFTLDKLIYKLVRQLQTVATDEVDSKLLQLYEYEKSRKPGKLNDSVYHANAHVILNEENIYRLQCSSTPSRLSIQIMDNMNEKPEMFAVSIDPDFSSYLQSDFLSASPCKKEPNGVILRRNKHKYRGLDELSAISSAMDGVKVINGLECKIACNSSKISYVLDTQDFFFRPRRKRGTSRTASTSTTRHSREERFRKLLA* |
ORF Type | 5prime_partial |
Blastp | Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 54.61% of identity |
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Blastx | Paired amphipathic helix protein Sin3-like 3 from Arabidopsis with 47.85% of identity |
Eggnog | Paired AMPhipathic helix protein(COG5602) |
Kegg | Link to kegg annotations (AT5G15020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442610.1) |
Pfam | Sin3 family co-repressor (PF08295.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer