miRNA 152 details

Id Micro152
SequenceGCGTATGAGGAGCCATGCATA 
Annotated namesaly-miR160a-3p; ath-miR160a-3p; bra-miR160a-3p; cpa-miR160c-3p; cpa-miR160f-3p; ptc-miR160b-3p; ptc-miR160c-3p; 
Annotated pre-miRNANone

Targets of miRNA 152

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_79979; FTRINITY_DN58196_c0_g1_i8 1351 1371 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79973; FTRINITY_DN58196_c0_g1_i2 3083 3103 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79975; FTRINITY_DN58196_c0_g1_i4 3083 3103 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79990; FTRINITY_DN58196_c0_g1_i19 3083 3103 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79977; FTRINITY_DN58196_c0_g1_i6 3351 3371 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79991; FTRINITY_DN58196_c0_g1_i20 3083 3103 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79976; FTRINITY_DN58196_c0_g1_i5 3351 3371 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79986; FTRINITY_DN58196_c0_g1_i15 3972 3992 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79982; FTRINITY_DN58196_c0_g1_i11 3972 3992 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79984; FTRINITY_DN58196_c0_g1_i13 3972 3992 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79985; FTRINITY_DN58196_c0_g1_i14 4240 4260 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79988; FTRINITY_DN58196_c0_g1_i17 4240 4260 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_79980; FTRINITY_DN58196_c0_g1_i9 4240 4260 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_70862; FTRINITY_DN87447_c0_g1_i1 539 559 TGTGTATGGCTACTCATGTGC BLAST psRNATarget
Ll_transcript_101070; FTRINITY_DN54960_c5_g1_i2 541 561 GGTGCATGGCTCATCCTACGC BLAST psRNATarget
Ll_transcript_101069; FTRINITY_DN54960_c5_g1_i1 855 875 GGTGCATGGCTCATCCTACGC BLAST psRNATarget
Ll_transcript_126652; FTRINITY_DN55669_c6_g1_i9 1470 1490 ATTGCATGGCTTTTTATGTGT BLAST psRNATarget
Ll_transcript_126653; FTRINITY_DN55669_c6_g1_i10 1587 1607 ATTGCATGGCTTTTTATGTGT BLAST psRNATarget
Ll_transcript_126655; FTRINITY_DN55669_c6_g1_i12 1470 1490 ATTGCATGGCTTTTTATGTGT BLAST psRNATarget
Ll_transcript_126660; FTRINITY_DN55669_c6_g1_i17 1587 1607 ATTGCATGGCTTTTTATGTGT BLAST psRNATarget
Ll_transcript_126651; FTRINITY_DN55669_c6_g1_i8 1470 1490 ATTGCATGGCTTTTTATGTGT BLAST psRNATarget
Ll_transcript_126658; FTRINITY_DN55669_c6_g1_i15 1587 1607 ATTGCATGGCTTTTTATGTGT BLAST psRNATarget
Ll_transcript_132589; FTRINITY_DN57589_c0_g2_i8 4420 4440 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_132571; FTRINITY_DN57589_c0_g2_i1 6743 6763 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_132580; FTRINITY_DN57589_c0_g2_i4 6873 6893 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_132583; FTRINITY_DN57589_c0_g2_i5 6967 6987 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_132596; FTRINITY_DN57589_c0_g2_i12 8500 8520 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_59613; FTRINITY_DN56234_c5_g3_i1 1695 1715 TCTTCATGGCTCTTCGTACGG BLAST psRNATarget
Ll_transcript_161682; FTRINITY_DN73835_c0_g1_i1 105 125 TATGTAAGGTTTTTCATATGC BLAST psRNATarget
Ll_transcript_174293; FTRINITY_DN52183_c5_g1_i12 1458 1478 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_174284; FTRINITY_DN52183_c5_g1_i3 1490 1510 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_174292; FTRINITY_DN52183_c5_g1_i11 1573 1593 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_174283; FTRINITY_DN52183_c5_g1_i2 1774 1794 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_174288; FTRINITY_DN52183_c5_g1_i7 1907 1927 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_174282; FTRINITY_DN52183_c5_g1_i1 2071 2091 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_133688; FTRINITY_DN17175_c0_g1_i1 519 539 TGTGCCTGGCTCCCCGTATGC BLAST psRNATarget
Ll_transcript_182873; FTRINITY_DN91596_c0_g1_i1 144 164 AGTGTATGGTTTCTCATAAGT BLAST psRNATarget
Ll_transcript_163518; FTRINITY_DN53221_c0_g2_i1 759 779 GCTGCATGGTTTCTTATGTGG BLAST psRNATarget
Ll_transcript_163515; FTRINITY_DN53221_c0_g1_i2 208 228 GCTGCATGGTTTCTTATGTGG BLAST psRNATarget
Ll_transcript_3174; FTRINITY_DN33173_c0_g1_i1 222 242 CGTATGTGGTTCCTCATATGT BLAST psRNATarget
Ll_transcript_299178; TRINITY_DN51511_c0_g1_i6 1617 1637 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_299187; TRINITY_DN51511_c0_g1_i15 1969 1989 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_299176; TRINITY_DN51511_c0_g1_i4 3004 3024 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_299175; TRINITY_DN51511_c0_g1_i3 3431 3451 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_299180; TRINITY_DN51511_c0_g1_i8 3597 3617 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_299173; TRINITY_DN51511_c0_g1_i1 3893 3913 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_299185; TRINITY_DN51511_c0_g1_i13 4161 4181 TGTGCATGCCTCCTCATATGC BLAST psRNATarget
Ll_transcript_531856; TRINITY_DN50004_c1_g1_i1 1761 1781 TGTGCATTGCTCTTTATACGT BLAST psRNATarget
Ll_transcript_531878; TRINITY_DN50004_c1_g1_i21 1761 1781 TGTGCATTGCTCTTTATACGT BLAST psRNATarget
Ll_transcript_366269; TRINITY_DN46349_c3_g2_i7 248 268 GGTGCATGGCTCATCCTACGC BLAST psRNATarget
Ll_transcript_366260; TRINITY_DN46349_c3_g2_i2 920 940 GGTGCATGGCTCATCCTACGC BLAST psRNATarget
Ll_transcript_302635; TRINITY_DN48276_c4_g1_i1 102 122 ATTGCATGGCTTTTTATGTGT BLAST psRNATarget
Ll_transcript_342360; TRINITY_DN49888_c1_g1_i10 6675 6695 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_342362; TRINITY_DN49888_c1_g1_i12 6693 6713 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_342356; TRINITY_DN49888_c1_g1_i7 6718 6738 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_342358; TRINITY_DN49888_c1_g1_i8 6805 6825 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_342350; TRINITY_DN49888_c1_g1_i3 6862 6882 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_342351; TRINITY_DN49888_c1_g1_i4 8538 8558 AGTGCATAGCTCCTCATGTGG BLAST psRNATarget
Ll_transcript_395104; TRINITY_DN36669_c0_g1_i1 1702 1722 TCTTCATGGCTCTTCGTACGG BLAST psRNATarget
Ll_transcript_325927; TRINITY_DN48068_c5_g1_i6 668 688 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_325925; TRINITY_DN48068_c5_g1_i4 2903 2923 AATGCATGGTTTTTCAGATGC BLAST psRNATarget
Ll_transcript_351713; TRINITY_DN42537_c0_g1_i1 226 246 TGTGCCTGGCTCCCCGTATGC BLAST psRNATarget
Ll_transcript_374294; TRINITY_DN47766_c3_g1_i5 191 211 GCTGCATGGTTTCTTATGTGG BLAST psRNATarget
Ll_transcript_374293; TRINITY_DN47766_c3_g1_i4 742 762 GCTGCATGGTTTCTTATGTGG BLAST psRNATarget
Ll_transcript_374291; TRINITY_DN47766_c3_g1_i2 742 762 GCTGCATGGTTTCTTATGTGG BLAST psRNATarget
Ll_transcript_448807; TRINITY_DN59785_c0_g1_i1 26 46 CGTATGTGGTTCCTCATATGT BLAST psRNATarget
Ll_transcript_288938; TRINITY_DN51361_c0_g1_i4 113 133 GTTGTATTGTTCCTCATATGG BLAST psRNATarget

Expression of miRNA 152


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)