Transcript | Ll_transcript_208178 |
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CDS coordinates | 3-1637 (+) |
Peptide sequence | INAVNSNRNWKGNNYNRNAGYSNNNRGQSMNTRRYQGNGVAGLLGKTPTYNKNAKICSFCGKDGHTIETCYFKHGFPPNFRFKSKTEAGSINNVSTNNEALGRNIEAETGECSDENQRLQLNTNDEHIANQISHVSALDQPANSGKFLNQNSWILDSGATDHITNNISSFIHYKEIKPIHVRLPNNVTIIAKHSGTIHLNQKLILYDVLYIPKFKYNLVSIHKLASSFGCKLVFDKDACLIQDIITLKTIGLAEVINHLYILNKTACLEQFVHTVNLSENCNNHDFDIWHFRLGHPSLFILNHVNKQFPFVKWNSAKVCDFCYLAKQARLPFPKSSSHTLQSFQLIHLDIWGPISVPTIHGQRYFLTIVDDFTRHTWIFLMTNKFETRNILQNFLVLVQNQYEQKVKTIRTDNGLEFIQPSFYDQLGIIHQRTCVETPQQNSVVERKHRHILNVTRSLLFQANLPKSLWGYAAKHAVHLINQLPTPVLNLKSPFETLFGKKPDLSKLKVFGCLAYASTILNHRTKNTHTHIYIYIHGVFLFILF* |
ORF Type | 5prime_partial |
Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 29.01% of identity |
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Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 28.68% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014617557.1) |
Pfam | GAG-pre-integrase domain (PF13976.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer