Transcript | Ll_transcript_227831 |
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CDS coordinates | 106-11313 (+) |
Peptide sequence | MQGLHHHQQQLAALLSAALPKDEISSSSSTTTAATTSSTNDPTSRISAITSLHRAILHPHNSLLITHSAAFLAQGFSQLLSDKSYEVRQLAVTAYGALCAVVCSIPVTSNARQNSVLLGTLVDRFIGWALPLLNNVTAVDGTKELALEGLREFLNVGDVVGTERYVLSILKACQVLIEDERTSLPLLHRLLAVITLISLKFIRCFQPHFTDIVDLLLGWALVPDLAESDRRVIMDSFLQFQKHWVGSLAMSLRLLTKFLGDMEALLPDGSPGTPPQFRRLVALLSCFSTILQSTASGLLEMNMLEQIVEPLSALLPRLLRCLSMIGQKFGWSEWIEDSWKCLTLLAEILCERFSSFYPHAVDILFQSLEFVATGQRAGFKKVTSFQVHGVLKTNLQLLSLQKLGLLPSSVRKLLQFDTSISQQRLHPNHLVTGSAAATYVFLLQHGNTEIVDEAVTSLIEELDLLKNMIEKNTGHADQLNYALAPKIFSKHELFALFKFDLKVLSSCVSFGGENNLIIQTEIDKLSLKRSEKLVSFITKKLNPSELPIQAFMELQVTVFKTLERLTSVEFLIKCSLREQNSDKDGVDFLTKKNEDHFNDVFSAVIIEHLEKYSMLIIKALHVSSPMAIKLVALDWVQKFCENVMAFNKISSTKDFICETCGHAGAIMNLVSSLLGCAFEREPEVRSHVTITLEMFMQAKLLHPVCFYPVAEVILEKLGDPGIEIRDAYLKLLAHVLPSTIYTCGLYNHGRFRPVDLGFGNCSKMHWKQLFALKQLPLQLHSQQLVSILSYISQRWKVPLSSWIQRLIHSCRSSKDAILSQPEETGNFGASSQWLDVPVDEDILEKICSVNNLAGAWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDVAHLLQLDNEQNDGNLSMIGSSGAHLLPMRLLLDFVESLKKNVYNAYEGSVILPPATRQSSLFFRANKKVCEDWFSRICEPMMNAGLALHCNDAVIQYCTLRLQELKNLFLSALKEKSRTQVNDNLHNIRARYKGDVLKVVRHISLALCKSSEPDSLIGLQKWVLITFSSLLGDENQSFNECRPVGPLSWIRGLVYQARGEYENAAAHFTHLLQTEELLSSLDSDGIQFVIARIIESYTAVSDWKSLETWLLELQLLRAKHAGKSYSGALTMAGNEINAIHALAHFDEGDNQAAWSCLDLTPKSNSELTLDPKIALQRSEQMLLQSLLFQKEGKTDKVLHDLQKARSMLEEPLSVLPLDGLAEAAPFAIQLHCITLLEEEYKLKSTHEKGKQLQSILNSLHPVPFSISKVRQDCNPWLKVLRVHQTISSTSSVTLKFCMNLLNLARKQRNLSLANRLNNYLKDHASNCTEERYNNLILNLQYESILLLYAENKFDDAFSNLWSFLRPSMVSSASRISDADERILKAKACLKLADWLKRDYSDWSPESIVLKVPADFDMAESAPLGRDGNEENINRKQKLSLITEEIVGTATKLSTQICPTMGKSWISYASWCFKQARDSFLAQNETTLHSCVFSPILVPEISPERFKLTKDEVQRVKSLIVCLFHDNSDTKGFIEELEEGSLLFNLSEVHSSNGNPLKTLVRHLVNIIETAAGAPGTENSGGERLSAMVSSQLRICLLHANLGLGQSDIISALDGFVDIWWSLRRRRVSLFGHAAHGYIQFLSHSSSHVRRCQMPGSDYVALKEKNGSYTLRATLFILHILLNYGVELKDTLESALSIVPLLPWQEVTPQLFARLSSHPEQVVRKQLEGLLIMLAKQSPCSIVYPTLVDVNAYGEKSSEELHHVLGCLRELYPHLVQDVQLMINELGNVTVLWEELWLSTLQDLHTDVMRRINVLKEEAARIAENITLSQTEKNKINSARYSAMMAPIVVALERRLASTSRKPETPHEAWFQEEYKEQLKSATVSFKTPPASSAALGDVWRPFDSIAASLASYQRKSSISLQEVAPHLALLSSSDVPMPGLEKQMKVPDADKATDLQGVVTIASFHEQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFLLSSSSTCSNSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQTRLHLAQFSSVGTTSTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPHEVKCKVLLDLMKEVPKHLLYQELWCASEGYKAFSSKMKRYSGSLAAMSMVGHVLGLGDRHLDNILIDFCSGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQMIEAALGLTGIEGSFRANCETVIGVLRNNKDILLMLLEVFVWDPLVEWTRGDFHDEAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDQLLMVLPAVESTLERFADVLNQYELASSLYCRADQERSNLMLHETSAKSIVAEATCNSEKIRASFEIQAREFTQAKAVIADKAQEAMTWAEQHGRILDALRCNLIPEINESFKLSNMEIALSLTSAVTVAGVPLAVVPEPTQAQCHDIDREVSQCITELDDGLNSATISLQAYSLALQRILPLNYLSTSAIHGWAQVLQLSINALSSDILSLARRQASELFAKFQGDSIDSIKNSHDDLCFRVEKYAAEIEKIEKECAALEGSIGLESELKTKDHLLSAFMKFMQSTGLLKREDGMSSVQSRHDGTTNIRLLGELEEEKALSVLNLSVSSLYNEVKHRILNICSDLSGGRNQYNMMQNDSGTIFAEFEEQVEKCNLVAEFVNDPLQSMGKETPSDNKVHLKFSSQSNSVSIFKTILFSCKGLVSQMTEVVLPNVIRSAVTLNSEVMDAFGLISQVRGSIETALEQLVEVEMERSSLVELEQNYFVKVGLITEQKLALEEAATMGRDHLSWEEAEELASQEEACRAQLDQLHQTWSQRDVRISSLIKREADIKNALVSVSCHFQSLVGLEDESELHILRSRSLLTALVKPFLELESSDMMLSSGDGSGAMPSNRFHTLADMINSGNSISDYVWKVGGLLNDHSFFIWKIGVIDYFLDTCIHDVALSLEQNLGFEQSLNFMKKKLEIQLQKHIGHYLKGRIAPCLLACLDEDIEHLKQLTESSNKLALDPVKRDGAVKKVSLMLEEYCNVHETAKAAKSASSLMKRQVNELKEALWKTTLEVAQMEWMHDVNLDPSYNRRITFEKYVDIDDSLYTVIVNLNRSKLLENIQSAVSNITRSMDCLQSCEQTSLIAEGQLERAMSWACGGPNSNSSGNNSTKNSGIPLEFHEHIKTRRQILWEFREKASDFVKLCMSVLEFEASRDGYLLIPGQPYPSRSSVDGKTWQQVYLNALTRLDVIFHSYTRTEQEWKLAQCTVEAASNGLYSATNELCTASLKAKSASGDLQNTVLSMRDCAYDANVSLSAFARVSRTHTALTSECGSMLEEVLAITEDIHDVHNLGKEAAAIHRSLMEDLSKVNGILLPLESVLSKDVAAMTDAITRERETKKEISHIHGQAIHQSYCLRIREACQTFKPLVPFLTSSVKGLYSSLTRLAKTANLHAGNLHKALEGIGESQEVKSQDIALSRSSAGGGDAVEFVDNEVENLSSSDCGDTEDLIGFSQLSLEDKDWISPPDTICYSSSGSDNTSTEVSLPDSLNDSAENKDVLSQASSSRNLTGHIHSTPLSQTGVEEILPFEASDSYPMEANVNGACSVKLIDEATEHPKATVKSDAIPTYSHHQSNGNLDKFEGEDESLSANKVKNDVEHHEAPDPNINVRSRVGRGMYEVFFTDLSCHHF* |
ORF Type | complete |
Blastp | Serine/threonine-protein kinase SMG1 from Mus with 37.28% of identity |
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Blastx | Serine/threonine-protein kinase SMG1 from Mus with 37.28% of identity |
Eggnog | phosphatidylinositol kinase activity(COG5032) |
Kegg | Link to kegg annotations (233789) |
CantataDB | Link to cantataDB annotations (CNT0002755) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454155.1) |
Pfam | Serine/threonine-protein kinase smg-1 (PF15785.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer