miRNA 156 details

Id Micro156
SequenceGCTCACCCTCTATCTGTCAGT 
Annotated nameszma-miR156b-3p; 
Annotated pre-miRNANone

Targets of miRNA 156

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_125236; FTRINITY_DN55609_c1_g1_i3 1816 1836 ACTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_125239; FTRINITY_DN55609_c1_g1_i6 2183 2203 ACTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_125240; FTRINITY_DN55609_c1_g1_i7 2298 2318 ACTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_60621; FTRINITY_DN56238_c0_g1_i2 1 20 CTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179199; FTRINITY_DN58663_c0_g1_i14 767 787 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179172; FTRINITY_DN58663_c0_g1_i3 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179169; FTRINITY_DN58663_c0_g1_i1 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179219; FTRINITY_DN58663_c0_g1_i25 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179201; FTRINITY_DN58663_c0_g1_i15 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179209; FTRINITY_DN58663_c0_g1_i18 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179171; FTRINITY_DN58663_c0_g1_i2 1509 1529 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179190; FTRINITY_DN58663_c0_g1_i7 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179216; FTRINITY_DN58663_c0_g1_i23 1509 1529 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179194; FTRINITY_DN58663_c0_g1_i10 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179189; FTRINITY_DN58663_c0_g1_i6 1509 1529 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179179; FTRINITY_DN58663_c0_g1_i4 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179202; FTRINITY_DN58663_c0_g1_i16 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179212; FTRINITY_DN58663_c0_g1_i21 1509 1529 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179192; FTRINITY_DN58663_c0_g1_i8 1509 1529 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179193; FTRINITY_DN58663_c0_g1_i9 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179222; FTRINITY_DN58663_c0_g1_i26 1257 1277 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_179183; FTRINITY_DN58663_c0_g1_i5 1509 1529 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_95463; FTRINITY_DN90264_c0_g1_i1 29 49 GTTGACAGATGGAGGGAGAGC BLAST psRNATarget
Ll_transcript_231626; FTRINITY_DN52314_c7_g3_i1 1038 1058 GTTGTTGGGTAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_217731; FTRINITY_DN56324_c0_g2_i1 1449 1468 TCTGATGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_274930; FTRINITY_DN36971_c0_g1_i1 736 756 ATTGATTGTTAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_27782; FTRINITY_DN22218_c0_g1_i1 234 254 GAAGAGAGATAGAGGGTGAGA BLAST psRNATarget
Ll_transcript_270760; FTRINITY_DN84072_c0_g1_i1 279 299 AATGAAGGATAGAAGGTGAGC BLAST psRNATarget
Ll_transcript_223986; FTRINITY_DN53151_c6_g4_i1 678 699 TTTGTCATGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_134068; FTRINITY_DN3400_c0_g1_i1 239 259 TCTAAAACATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_232899; FTRINITY_DN50307_c0_g1_i3 61 81 TGTGGATGATGGAGGGTGAGC BLAST psRNATarget
Ll_transcript_232897; FTRINITY_DN50307_c0_g1_i1 61 81 TGTGGATGATGGAGGGTGAGC BLAST psRNATarget
Ll_transcript_126951; FTRINITY_DN55634_c0_g1_i22 1141 1163 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_126950; FTRINITY_DN55634_c0_g1_i21 1141 1163 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_126947; FTRINITY_DN55634_c0_g1_i18 1141 1163 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_126937; FTRINITY_DN55634_c0_g1_i8 1141 1163 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_97188; FTRINITY_DN47682_c0_g1_i2 2405 2425 AAATTCAGATAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_126935; FTRINITY_DN55634_c0_g1_i6 1141 1163 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_126949; FTRINITY_DN55634_c0_g1_i20 1141 1163 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_126942; FTRINITY_DN55634_c0_g1_i13 1141 1163 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_243302; FTRINITY_DN53031_c0_g2_i2 901 921 ATTCATATATAGAGGGTGGGT BLAST psRNATarget
Ll_transcript_19309; FTRINITY_DN54581_c5_g1_i5 61 81 AGAGGTAGTTAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_243301; FTRINITY_DN53031_c0_g2_i1 1813 1833 ATTCATATATAGAGGGTGGGT BLAST psRNATarget
Ll_transcript_230727; FTRINITY_DN52324_c1_g1_i3 867 887 ATTAATGAATAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_22809; FTRINITY_DN80438_c0_g1_i1 96 116 ATTGTGTGATGGAGGGTGAGC BLAST psRNATarget
Ll_transcript_40252; FTRINITY_DN47165_c0_g2_i1 230 250 GAAGAGAGGTGGAGGGTGGGC BLAST psRNATarget
Ll_transcript_224757; FTRINITY_DN56194_c3_g4_i6 172 192 AGTAATAGACAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_224760; FTRINITY_DN56194_c3_g4_i7 172 192 AGTAATAGACAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_78921; FTRINITY_DN58182_c1_g2_i1 2759 2779 GTTTGGAGGTGGAGGGTGAGC BLAST psRNATarget
Ll_transcript_439575; TRINITY_DN48377_c0_g2_i1 1422 1442 ACTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_439583; TRINITY_DN48377_c0_g2_i8 1818 1838 ACTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_439577; TRINITY_DN48377_c0_g2_i3 1645 1665 ACTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_439587; TRINITY_DN48377_c0_g2_i11 1818 1838 ACTGATGGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_356481; TRINITY_DN45840_c1_g1_i1 506 526 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_356487; TRINITY_DN45840_c1_g1_i7 506 526 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_356484; TRINITY_DN45840_c1_g1_i4 981 1001 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_356486; TRINITY_DN45840_c1_g1_i6 981 1001 AATTGCAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_469606; TRINITY_DN45492_c0_g5_i1 1050 1070 GTTGTTGGGTAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_301516; TRINITY_DN48275_c0_g1_i1 81 101 TATTATTGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_457682; TRINITY_DN49915_c1_g1_i3 2846 2866 ATTGATTGTTAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_457683; TRINITY_DN49915_c1_g1_i4 3997 4017 ATTGATTGTTAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_434128; TRINITY_DN46692_c6_g7_i2 679 700 TTTGTCATGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_434142; TRINITY_DN46692_c6_g7_i6 679 700 TTTGTCATGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_434135; TRINITY_DN46692_c6_g7_i5 679 700 TTTGTCATGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_461790; TRINITY_DN51139_c6_g4_i1 206 226 TGTGGATGATGGAGGGTGAGC BLAST psRNATarget
Ll_transcript_461791; TRINITY_DN51139_c6_g5_i1 61 81 TGTGGATGATGGAGGGTGAGC BLAST psRNATarget
Ll_transcript_429509; TRINITY_DN52147_c5_g1_i17 17 37 CTTGACAGGTAGATGTTGAGC BLAST psRNATarget
Ll_transcript_388935; TRINITY_DN50910_c4_g1_i4 1160 1182 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_308644; TRINITY_DN40601_c0_g1_i2 2441 2461 AAATTCAGATAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_388942; TRINITY_DN50910_c4_g1_i11 1160 1182 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_388946; TRINITY_DN50910_c4_g1_i15 1160 1182 ATTGAAGAAGATAGAGGGTGAGC BLAST psRNATarget
Ll_transcript_515151; TRINITY_DN50819_c2_g3_i1 98 118 GAAGATAGAAAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_474910; TRINITY_DN47426_c2_g3_i2 1921 1941 ATTCATATATAGAGGGTGGGT BLAST psRNATarget
Ll_transcript_528827; TRINITY_DN51057_c0_g3_i2 1067 1087 ATTAATGAATAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_528829; TRINITY_DN51057_c0_g3_i3 1067 1087 ATTAATGAATAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_526860; TRINITY_DN47573_c2_g6_i4 543 563 AGTAATAGACAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_428513; TRINITY_DN42035_c0_g1_i1 261 281 GAAGAGAGGTGGAGGGTGGGC BLAST psRNATarget
Ll_transcript_526879; TRINITY_DN47573_c2_g6_i6 792 812 AGTAATAGACAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_526854; TRINITY_DN47573_c2_g6_i3 920 940 AGTAATAGACAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_526852; TRINITY_DN47573_c2_g6_i2 920 940 AGTAATAGACAGAGGGTGAGT BLAST psRNATarget
Ll_transcript_305913; TRINITY_DN52205_c3_g4_i1 1202 1222 CATGGAGGATCGAGGGTGAGC BLAST psRNATarget

Expression of miRNA 156


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)