| Transcript | Ll_transcript_235004 |
|---|---|
| CDS coordinates | 1067-2392 (+) |
| Peptide sequence | MNSLSKSLQPRVVGCIHSWQLWEELDSYCNSQTKARSRQLRSQLRSISQGSSTISEYFTKIKGLVDALIFIGTPISSSEHIDYILDGLNEEFQPVITSIESQIDHPTIHNLESFLLTYESRLEKNKHKALSDALSVNLTTDSPSYTSQPVNSPQPRPTSHIPPSYYSPKTEQHPTHHLTGYVHHYRGNNRTRRGNYNGRQRGGRMYGRSPSFCIYCKRPGHDVSNCYYTPSTFGAPPSYNAPHYHSAPHNSHPLHYNSSSSRFPAHFYPDYPMDFNTGAHSLPHTDSLLGPGPLSGPKHHHPPYVMSAQTGPHKSTHPHRDSRPVTWYPDSGATNHLTADASLVHDPAETFSHDQIYMGNGSGIPIHSVGTSVFTSHINPNISLTLKNLLLVPSITKNLLSVSQFARDNSCYFEFHANACFVKSQVTNEVILRGTVTKEGLY |
| ORF Type | 3prime_partial |
| Blastp | - |
|---|---|
| Blastx | Copia protein from Sophophora with 39.2% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447442.1) |
| Pfam | gag-polypeptide of LTR copia-type (PF14223.5) |
| Rfam | - |
| GO | - |
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Alignmet by MSA Viewer