Transcript | Ll_transcript_164296 |
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CDS coordinates | 306-2450 (+) |
Peptide sequence | MANNSQPPGMQFRPVIQSQQGQPFVPMTSQQFGHAGHAIPSSNVVQSQQVQYSQPVQQLTPRPIQPGHPAPQAPMPYIQTSRPLTSALPHSQQMVSHLSNHMPGLAVSGAPPHPSYTFAPSYGQQQDNANALAQYQPPPQMLAPPAGQPWLSSVSQSASAVTPVQQGGVQSSDSTSTDARTSTPNQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGKKYYYNKITQQSTWSIPEDLKLAREQAQKAVNQGVQSETTDASNAVVSSNATSTDANVAISNTSLTSNGIASSPASLPPIGAADPQHLISGSGTPVSHSIVTPGSTGVEQSTMTITESITVAGSSGAATDSLDSKVPSIVENQASQNFATSITGASLQDIEESKRGVTGVGKVNVTPPEEKANDDETLVYANKLEAKTAFKGLLESANVHSDWTWEQAMREIINDKRYNALKTPGERKQAFNEYLGQRKKIEAEERRMKQKRAREEFTKMLEECKELTSSIRWSKAISMFENDERFNAVDKQRDREDLFESYMVELERKEKEIAAEEHRQNIAEYRKFLESCDYVKVYSQWRKVQDRLEDDDRYLRLEKIDRLLVFQDYVRDLEKEEEEKKRIQKDRVYRGERKNRDAFCKLLEEHVAAGILTAKTQWRDYCLKVRDLPQYQAVASNTSGSTPKEIFEDVAVELENQYHEDKTL |
ORF Type | 3prime_partial |
Blastp | Pre-mRNA-processing protein 40A from Arabidopsis with 56.73% of identity |
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Blastx | Pre-mRNA-processing protein 40A from Arabidopsis with 55.03% of identity |
Eggnog | PRP40 pre-mRNA processing factor 40 homolog(COG5104) |
Kegg | Link to kegg annotations (AT1G44910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436968.1) |
Pfam | WW domain (PF00397.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer