Transcript | Ll_transcript_162337 |
---|---|
CDS coordinates | 3-899 (+) |
Peptide sequence | DTEEARTKKYVVSRYLKYHTTDDKPIESQSHEIHKIAHEIIFEGMVLDEQLQVTVIIDKLSPSWKDFKNLLRHKTKEISLESLITRLRIEEEARRHDQKDEVLIVSNNGTKKKFSSAVLKPSGTNFKNQNRSEHKAKNISRNKNWNLQKVQYVKPPAKNDSDNLFICFKCGKSGHMARKCRNKPMDHPPHANMVDELFVAVLSEVTMVGGTDGWWVDIGASCHVCYDRAMFKNYTDADDKKVLLGDSHTTIVAGAGDVELKFTSGKTLILKDVMHTLEMRKNLVSGFLLNKAGFTQTI* |
ORF Type | 5prime_partial |
Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 23.96% of identity |
---|---|
Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 23.96% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014618094.1) |
Pfam | gag-polypeptide of LTR copia-type (PF14223.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer