Transcript | Ll_transcript_246378 |
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CDS coordinates | 1-2463 (+) |
Peptide sequence | NINYLFLGRARVTIEHQTVSHGIQTPRSSLSLKHFFSLHSFISHSKTPSFKYPSLFSRAQKQYNTMKRDFYEISEDEWENHNTSFKPSRVLKAPRLSSSSSSSSRLPPPPIESFAFGSNNKPEVSDHGDDDCVEIAPNSTLFRESNDSLDDLEDEDVDNSTAAPAPNRGRRFIIDDEDDDVSDRDVAEVYEIESTEEEVEEVEDLNEGDVVGKALHKCSKISTELRKELFGSSGTACERYSEVESSSVKIVTQEDVDEACGSEDSDFQPLLKPYQLVGVNFLLLLHRKGIGGAILADEMGLGKTVQAITYLTLLKHLHDDPGPHLIVCPASVLENWERELKKWCPTFSVLQYHGAGRAAYCKELNSLSKAGLPPPFNVLLVCYSLFERHSPQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPNIFDSEDVDLKKLLNAEDRDLIGRMKSILGPFILRRLKSDVMQQLVKKIQQVEYVVMEKQQEHAYKEAIEDYRAVSQARIAKCSDLNSKNVLEVLPKRQINNYFVQFRKIANHPLLIRRIYNDEDVIRFARKLHPVGAFGYECTLDRVIEELKSYNDFSIHRLLLHYGVKDKKGILSDKHVMLSAKCRSLSKLLPSLKKGGHRVLIFSQWTSMLDILEWTLDVIGFTYKRLDGSTQVAERQTIVDTFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLVLDAAVLESMDVVNEGDMPEKTMGEILSAILLS* |
ORF Type | 5prime_partial |
Blastp | Protein CHROMATIN REMODELING 19 from Arabidopsis with 71.46% of identity |
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Blastx | Protein CHROMATIN REMODELING 19 from Arabidopsis with 73.09% of identity |
Eggnog | helicase activity(ENOG410XNUT) |
Kegg | Link to kegg annotations (AT2G02090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461602.1) |
Pfam | SNF2 family N-terminal domain (PF00176.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer