Transcript | Ll_transcript_129522 |
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CDS coordinates | 220-2730 (+) |
Peptide sequence | MRYSVILGSSIVTPPNPSSSSSSSSSSSSSSSTPSSHNRHFTKPHYSSLPTLSPSPSNTISRTLQVPLNQRPKPQQQLQFLFDDVSQLQILVRNVVAGIRSRKVRSVIDTLNKVLKEQEQFGGGGGSLSLSTHFDASSMDIIGKECVSMVKCGRIHEAVEFMEVLSRFQLSVRKLVQPSDIIKQCVLSRNPNLAVRYACLLPHAHILFCNIICEFGKGRDLASALKAYDASKKHLNSPNMYIYRAIIDACGLCGDCMKSRYIYEDLLNQKITPNIYVFNSLMNVNVHDLSYTLKLHENMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYRELKHLESVGRLKLDVFTYSTIIKVFADAKMWQTALKIKQDMLSAGVSLNTVAWSSLINACAHAGLVEQSIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLESSGEGYKSNFEQGDMHNATNLPTGISNSHILSFAKRFPFKPTTTTYNILLKACGTDYYHAKAIINEMKTIGLSPNHISWSILIDICAESENVEGALEILKTMSYDGIRADVVTYTTAIKVCVESKDFKQAISLYEEMKRFEIHPNLVTYNTLLKARSKYGSLLEVQQCLAIYQDMRKAGYKPNDFYLEGLIEEWCEGVIQDNTWDEGEFSSSNKSEIERPESLLLEKIAVHLLNRVADILTIDVQELTKVEARLVILAVLRMIKENYGLGHSVKNDDILIIIGATKVNETPAKHILEVEEAIVKLLQNELGLEVLAGRTRFAPSDTAKLENNKLSNLNIEAVPRENALPTRMGFHRRSPAVLHKLKVTKKSLYHWLHRKVTVEYSF* |
ORF Type | complete |
Blastp | Pentatricopeptide repeat-containing protein At5g02830, chloroplastic from Arabidopsis with 50.34% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At5g02830, chloroplastic from Arabidopsis with 54.68% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT5G02830) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425441.1) |
Pfam | Pentacotripeptide-repeat region of PRORP (PF17177.3) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer