Transcript | Ll_transcript_180116 |
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CDS coordinates | 838-2358 (+) |
Peptide sequence | MVSNGVHNKSVSRKGSDAGSSATTKEMSALSQFCVDLTERASEGLVDPVIGREVEVQRIIQILGRKTKSNPILLGESGVGKTAIAEGLAIHIARADIAPFLLTKRIMSLDVAMLMAGAKERGELEERVTKLIKEIIKSGDVILFIDEVHTLVQSGTSGKGNKGSGLDISNLLKPALGRGQFQCIASTTIDEYRLHFEKDKALARRFQPVWVDEPSEDDAVKILMGLREKYEAHHKCRFTEDAIKAAVNLSSRYICDRYLPDKAIDLIDEAGSRAHIDDFKRKKELDNCVLLKSPTDYWQEIRDVQAMHEMESKLKYYGTSSIDDTSELIVDSYLPSEANDNEPVVVGPEDIATVASIWSGIPVQQLSVDQRTLLLDLNNQLRKRVIGQDEAVLAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELAKSLAACYFGSEAAMIRLDMSEYMERHTVSKLIGSPPGYVGYGEGGILTEAIRRKPFTLLLLDEIEKAHPDIFNILLQ |
ORF Type | 3prime_partial |
Blastp | Chaperone protein ClpD, chloroplastic from Arabidopsis with 74.04% of identity |
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Blastx | Chaperone protein ClpD, chloroplastic from Arabidopsis with 71.67% of identity |
Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
Kegg | Link to kegg annotations (AT5G51070) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429737.1) |
Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer