Transcript | Ll_transcript_182180 |
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CDS coordinates | 3-2015 (+) |
Peptide sequence | DLYTWGDGTHNSGLLGNGNEVSHWIPKKVSGDMEGVQISFVSCGPWHTAIVTSAGKLFTFGDGSFGALGHGDHSSTTIPREVETLKGLRTTWVSCGVWHTASVVQVNESMESSMQSLCGKLFAWGDGDEGRLGHVDKKPRLVPDCVTTLNNENICRVACGQNLTIALTTSGHVYTMGSAAYGQLGCPASDGKVPGRVEGELADSFVDDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDIDHRDKPTLVPFLKDKQVKSVACGSNFTAVICLHKWISSADHSVCSACRNPFGFIRKRRNCYNCGLVFCIGCSSRKSTKASLAPDANKPYRVCDDCYSKLKKAEESISLVQTPTSRIVSANDTRATKLQASLSTLAPVGSIVRGASKYKNLPELHDNHVFSALSGKLRLGTPPIKASNSHFRTPRKRHSISVLPYRGASQSSSISPKSSTQQSCTDIHDNSKHMNDILSQEVICLRAQIEDLTHKSNCLEAELERTSKQLKQVTAVAADEADKCISAKELIKMLTAQLKEMVQVQRLLEGHNADSIADLYSKTTVNTLNQSVEKSHMTNTITPSNGSNSNAANRILPNGNKTQSGKTEWVVQDEPGVYITLSSLSGDGIELKSVRFSKRHFTEEQAEKWWAENGTKVLERHNVVSLLNLKQPSQTISMTL* |
ORF Type | 5prime_partial |
Blastp | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 44.52% of identity |
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Blastx | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 43.96% of identity |
Eggnog | regulator of chromosome condensation(COG5184) |
Kegg | Link to kegg annotations (AT1G76950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454817.1) |
Pfam | Regulator of chromosome condensation (RCC1) repeat (PF00415.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer