Protein coding transcript 170512

TranscriptLl_transcript_123850
CDS coordinates124-3891 (+)
Peptide sequenceMAVSEEECSSTKRGGGGGAAARSFSSSSSARRYYLSKCVLRGSVVLQLLYGHIRSPTSNDVVFAKETSIELAVIGEDGDVHSVCDQPVFGTIKDLAILPWNDKFCARDPQMWGKDLLVALSDSGKLSLLTFCNEMHRFFPITHVELSNPGNPRDLPGRMLAIDSSGCFIAASAYEDRLVLFSMSMTGNDIIDERITYPSEGEGTAGTSRSIQRTSIRGTIWSMCFISQNSRQPSKEHNPLLAVILNRKGSLLNELLLLEWNIKARTIFVISLYVEAGPLAHDIVEVPNSCGLAFLFRAGDALLMDFRDPHNPCCVYRTSLNFLPNVVEEQTYVEDSCKLHDIDDERFNVAACALLELSDYDPMCIDSDNGSTSSSYKYVCSWCWEPENGKDPRMIFCIDSGEFFMIEIHFDPDDLNVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGMLLKLVDGRLCHSNPIQNIAPILDMTVVDYHDERHDQMFACCGVAPEGSLRIIRSGISVEKLLRTAPIYQGVTGTWTVRMKVADSYHSFLVLSFVEETRILSVGLSFTDVTDSVGFHPNVCTLACGLVSDGLLVQIHQSTVRLCLPTKAAHPEGIPLSSPICTSWSPDNVNISLGVVGHNFVVVSTSNPSFLFILGVRLLSASHYEIYEMQHLELQNELSCISIPRQKNVQKQTHSPIPANNSCISSFLSGVDNNKTFIIGTHKPSVEIWSFASDRVTVVARGTISLTNTMGTAITGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPAEPSPSSPLNVVDTASSSINLVNSVTNVFDKRSDLPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHTARHSLSYTSISFQPSTHVTPVSSVDCPKGILFVAENSLHLVEMVQSKRLNVQKFHLEGTPRKVLYHNESRMLLVMRTELNCGTCLSDICCVDPLSGSVLSSFRLELGETGKSMELIRVGSEQVLVVGTSLSSGPAIMPNGEAESAKGRLLVLCLDHVQNSDSGSMTFCSKAGSSSQRTSPFHEIVAYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLVYATTWQGMVLAICPYTDHYFLASAGNAFYLCGFPSDHPLRVRRYAVGRTRFMVTSLTTDSTRIAVGDCRDGILFYYYHEEARKFEQLYCDPSQRLVADCILMDTETAVVSDRKGSIAVLCTEYLEGKPELSLLSNQVLASHFLIPGLLLVFGILFSLVPGFSKFELFAFMTTKTFIGVL*
ORF Typecomplete

Annotations of Ll_transcript_123850

BlastpDNA damage-binding protein 1b from Arabidopsis with 22.66% of identity
BlastxDNA damage-binding protein 1 from Gallus with 22.42% of identity
EggnogDNA- binding protein(ENOG410XPF6)
KeggLink to kegg annotations (AT4G21100)
CantataDBLink to cantataDB annotations (CNT0000034)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444144.1)
PfamMono-functional DNA-alkylating methyl methanesulfonate N-term (PF10433.8)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer