Transcript | Ll_transcript_121793 |
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CDS coordinates | 386-3130 (+) |
Peptide sequence | MASTPSPQCSSLPSRPENTTSHRHHHHNTTTTTTTNHHNSNSNRNNNLRHCNNRNNNLRHHNSYNNNRFSSYNRYSSNASNGNGANYGSGSGVGGGGGGGAVSAAAAAATGGAIGFSSSFIGGVRKTGLGHEFSGRRSTRFVSKMYSVQTRASSNKNYHSAVADEALRCLVKAGNDCSAIDNVLLSFENRLVRVEDYIYLLKEFVNEGTYLLANKCYDFAMGIWNGCGTRLERGKLTSTMIGTLGRMRKVDDARRLFEFAKNEGYGNTVYSYSSMISALGRNGRFHEAVSLFWAMRNSGMEPTLITYNSLIDAGAKAQVEFSKVVKFFDELVTKGIKPDRLTYNSLLSVCVPRGLWEVAQNLLAEMEQRGIDRDVYTYNTYLDTLCKGGQMDLAGKVMTEEMPARKIYPNVVTYSTMMDGYAKAGRLEDALYLYNEMKRLSIRFDRVSYNTLVAVFAKLGLFEEVRNIIKDMESCGLTKDVVTYNALLGGYGKHSMYDEVRRLFEEMKAKNIHPNMLTYSTMIDVYTKGCMYMEAMDVYKEFKKEGLEADVVFYSSLIDVLCKNGLVECAMMLLEMMTEDGIRPNVVTYNSIIDAFGQVMGLEWRSDTSFEADEHQSTRNSSQLVDTFQSQVGDKEDDRVLKMFEQLAVDKSGHTNKDLRNRQDKFNILWILNKMHELKIKPNVVTFSAILNACSRCNSFGDASKLLDELCLFDNQVYGVAHGLLLGYRENIWFKAQSLFDEIKHMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGRRRNVWKGDWSESCLDLHLMSCGAACAMVHAWLLNIRTVVFEGSELPKLLSILTGWGKHSKVVGDGALRRAVEALLNRIGAPFRNAECNIGRFISPGYVVAAWLKQSSTLNVLVLHDDISDSRPVGQVYNLQALCM* |
ORF Type | complete |
Blastp | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic from Arabidopsis with 54.03% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic from Arabidopsis with 56.11% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT2G31400) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452137.1) |
Pfam | Pentatricopeptide repeat domain (PF13812.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer