ta-siRNA 172 details

ID172
SequenceAAGACTTCTAAAAGTGACAATGGA 

Targets of siRNA 172

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_188928; 189 212 TCCATTGTCACTTTTAGAAGTCTT BLAST
Ll_transcript_188887; 401 424 TCCATTATCACTTTTAGAAGTCTT BLAST
Ll_transcript_188936; 153 176 TCCATAGTCACTTTTAGAAGTCTT BLAST
Ll_transcript_188934; 153 176 TCCATAGTCACTTTTAGAAGTCTT BLAST
Ll_transcript_188921; 189 212 TTCAGTGTCACTTTTAGAAGTCAT BLAST
Ll_transcript_188931; 189 212 TTCAGTGTCACTTTTAGAAGTCAT BLAST
Ll_transcript_30062; 468 491 TCCATTATTACTTTTAGAAGTCTT BLAST
Ll_transcript_49577; 1666 1691 TTTAACTTGTCAATTTTAGAAGTCTC BLAST
Ll_transcript_106086; 141 164 TTCATTATCACTTTTAGAAATCTT BLAST
Ll_transcript_155274; 358 381 TCTATTATCACTTTTACAAGTCTT BLAST
Ll_transcript_29625; 899 922 TGTGTAGTCACATTTAGAAGTCTT BLAST
Ll_transcript_368711; 321 344 TCCATTGTCACTTTTAGAAGTCTT BLAST
Ll_transcript_368710; 970 993 TCCATTGTCACTTTTAGAAGTCTT BLAST
Ll_transcript_451590; 231 254 TCCATTATCACTTTTAGAAGTCTT BLAST
Ll_transcript_302215; 259 282 TTCATTATCACTTTTAGAAGTCTT BLAST
Ll_transcript_368714; 970 993 TCCATTATTACTTTTAGAAGTCTT BLAST
Ll_transcript_500388; 2149 2174 TTTAACTTGTCAATTTTAGAAGTCTC BLAST
Ll_transcript_500405; 2178 2203 TTTAACTTGTCAATTTTAGAAGTCTC BLAST
Ll_transcript_500384; 2281 2306 TTTAACTTGTCAATTTTAGAAGTCTC BLAST
Ll_transcript_382348; 315 338 TTCATTATCACTTTTAGAAATCTT BLAST
Ll_transcript_532504; 1086 1109 TCTATTATCACTTTTACAAGTCTT BLAST
Ll_transcript_532519; 1086 1109 TCTATTATCACTTTTACAAGTCTT BLAST
Ll_transcript_324034; 858 881 TGTGTAGTCACATTTAGAAGTCTT BLAST
Ll_transcript_324030; 2209 2232 TGTGTAGTCACATTTAGAAGTCTT BLAST

Expression of siRNA 172


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)