Protein coding transcript 172537

• Transcript: Ll_transcript_24689
• CDS coordinates: 2-817 (+)
• Peptide sequence: KNLKTLNPNFLLIKTTTSIISFLHSHHFHKPFLAATFCFSKMAIPRGRGGSGGGFRGRGGGDRGRGRGFGGRGGDRGGTPFKPRGGGRGGARGGRGGRGGRGGGMKGGNKVVVEPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQKEDGSKEEYRIWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGIVDVIFSDVAQPDQVWC*
• ORF Type: 5prime_partial

Annotations of Ll_transcript_24689

• Blastp: Mediator of RNA polymerase II transcription subunit 36a from Arabidopsis with 91.46% of identity
• Blastx: Mediator of RNA polymerase II transcription subunit 36a from Arabidopsis with 91.25% of identity
• Eggnog: Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (By similarity)(COG1889)
• Kegg: Link to kegg annotations (AT4G25630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448854.1)
• Pfam: Fibrillarin (PF01269.16)
• Rfam: snoR60 (RF00339)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;