miRNA 173 details

Id Micro173
SequenceGGAATGTCGTCTGGTTCGAG 
Annotated namesgma-miR166i-5p; 
Annotated pre-miRNANone

Targets of miRNA 173

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_137058; FTRINITY_DN58074_c0_g1_i14 1718 1737 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_137061; FTRINITY_DN58074_c0_g1_i16 2585 2604 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_137056; FTRINITY_DN58074_c0_g1_i13 2838 2857 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_137042; FTRINITY_DN58074_c0_g1_i8 2967 2986 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_137060; FTRINITY_DN58074_c0_g1_i15 3220 3239 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_41700; FTRINITY_DN74692_c0_g1_i1 891 910 TTCGAAACAGACGATATTTC BLAST psRNATarget
Ll_transcript_26368; FTRINITY_DN51704_c0_g1_i4 2535 2554 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26381; FTRINITY_DN51704_c0_g1_i17 2742 2761 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26376; FTRINITY_DN51704_c0_g1_i12 2831 2850 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26372; FTRINITY_DN51704_c0_g1_i8 2849 2868 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26365; FTRINITY_DN51704_c0_g1_i1 2944 2963 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26379; FTRINITY_DN51704_c0_g1_i15 3218 3237 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26367; FTRINITY_DN51704_c0_g1_i3 2934 2953 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26374; FTRINITY_DN51704_c0_g1_i10 3029 3048 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26366; FTRINITY_DN51704_c0_g1_i2 3034 3053 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_26375; FTRINITY_DN51704_c0_g1_i11 3320 3339 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_57674; FTRINITY_DN57820_c1_g1_i12 179 198 GTTGGCCCAGATGACATTTC BLAST psRNATarget
Ll_transcript_48953; FTRINITY_DN85319_c0_g1_i1 97 116 CTCGAGCCAAACAACATTCC BLAST psRNATarget
Ll_transcript_164663; FTRINITY_DN53203_c0_g4_i3 44 63 CTTGAATCGGACAGCATTCC BLAST psRNATarget
Ll_transcript_86275; FTRINITY_DN61348_c0_g1_i1 62 81 CTCCAACCAGATGACCTTCT BLAST psRNATarget
Ll_transcript_198351; FTRINITY_DN88948_c0_g1_i1 79 98 CGCGGACCGGACGACATCCC BLAST psRNATarget
Ll_transcript_227302; FTRINITY_DN56119_c4_g4_i2 248 267 CTCCAGCCAGACCGCATTCC BLAST psRNATarget
Ll_transcript_227384; FTRINITY_DN56153_c1_g1_i2 285 304 TTTGGATCAGATGATATTTT BLAST psRNATarget
Ll_transcript_227309; FTRINITY_DN56119_c4_g4_i5 248 267 CTCCAGCCAGACCGCATTCC BLAST psRNATarget
Ll_transcript_227383; FTRINITY_DN56153_c1_g1_i1 285 304 TTTGGATCAGATGATATTTT BLAST psRNATarget
Ll_transcript_157734; FTRINITY_DN54782_c9_g1_i8 1506 1525 TTTGAACTAGATGACACTTC BLAST psRNATarget
Ll_transcript_157749; FTRINITY_DN54782_c9_g1_i18 1587 1606 TTTGAACTAGATGACACTTC BLAST psRNATarget
Ll_transcript_227304; FTRINITY_DN56119_c4_g4_i3 248 267 CTCCAGCCAGACCGCATTCC BLAST psRNATarget
Ll_transcript_151886; FTRINITY_DN32620_c0_g2_i1 197 216 GATGAATTAGATGACATTCT BLAST psRNATarget
Ll_transcript_119744; FTRINITY_DN58278_c0_g1_i8 1116 1135 ATTGAACCAGACCACATTTG BLAST psRNATarget
Ll_transcript_119759; FTRINITY_DN58278_c0_g1_i16 1263 1282 ATTGAACCAGACCACATTTG BLAST psRNATarget
Ll_transcript_255998; FTRINITY_DN59103_c2_g1_i12 3232 3251 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_255987; FTRINITY_DN59103_c2_g1_i7 3331 3350 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_256004; FTRINITY_DN59103_c2_g1_i15 3503 3522 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_255986; FTRINITY_DN59103_c2_g1_i6 3798 3817 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_255981; FTRINITY_DN59103_c2_g1_i3 3874 3893 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_256002; FTRINITY_DN59103_c2_g1_i13 3947 3966 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_41073; FTRINITY_DN44830_c0_g1_i2 93 112 ATCGAACAAAACGACATTCT BLAST psRNATarget
Ll_transcript_41074; FTRINITY_DN44830_c0_g1_i3 93 112 ATCGAACAAAACGACATTCT BLAST psRNATarget
Ll_transcript_41072; FTRINITY_DN44830_c0_g1_i1 93 112 ATCGAACAAAACGACATTCT BLAST psRNATarget
Ll_transcript_128292; FTRINITY_DN53465_c0_g6_i2 564 583 ATCGAACCGGATGGTTTTCC BLAST psRNATarget
Ll_transcript_275225; FTRINITY_DN50083_c0_g1_i9 1056 1075 GTCGAATCAGATGGTATTAC BLAST psRNATarget
Ll_transcript_105797; FTRINITY_DN52955_c3_g4_i1 920 939 ATTGAGCCAGATGACAGTTC BLAST psRNATarget
Ll_transcript_275219; FTRINITY_DN50083_c0_g1_i3 1690 1709 GTCGAATCAGATGGTATTAC BLAST psRNATarget
Ll_transcript_275221; FTRINITY_DN50083_c0_g1_i5 1894 1913 GTCGAATCAGATGGTATTAC BLAST psRNATarget
Ll_transcript_267337; FTRINITY_DN55827_c1_g1_i5 256 275 GTTGAGTCAGGCGATATTTT BLAST psRNATarget
Ll_transcript_267338; FTRINITY_DN55827_c1_g1_i6 256 275 GTTGAGTCAGGCGATATTTT BLAST psRNATarget
Ll_transcript_267343; FTRINITY_DN55827_c1_g1_i10 256 275 GTTGAGTCAGGCGATATTTT BLAST psRNATarget
Ll_transcript_267336; FTRINITY_DN55827_c1_g1_i4 256 275 GTTGAGTCAGGCGATATTTT BLAST psRNATarget
Ll_transcript_267342; FTRINITY_DN55827_c1_g1_i9 256 275 GTTGAGTCAGGCGATATTTT BLAST psRNATarget
Ll_transcript_145136; FTRINITY_DN59069_c5_g2_i2 133 152 AAAGAAACAGACGATATTCC BLAST psRNATarget
Ll_transcript_145140; FTRINITY_DN59069_c5_g2_i3 149 168 AAAGAAACAGACGATATTCC BLAST psRNATarget
Ll_transcript_233659; FTRINITY_DN52808_c0_g1_i8 70 88 GTTGAACCGACGACATTCC BLAST psRNATarget
Ll_transcript_509268; TRINITY_DN48101_c1_g2_i2 2603 2622 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_509281; TRINITY_DN48101_c1_g2_i5 2985 3004 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_509263; TRINITY_DN48101_c1_g2_i1 3238 3257 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_509277; TRINITY_DN48101_c1_g2_i4 2603 2622 GTTGAGCCAGACGGCATTTC BLAST psRNATarget
Ll_transcript_328170; TRINITY_DN48092_c2_g1_i21 2285 2304 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_328138; TRINITY_DN48092_c2_g1_i6 2934 2953 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_328148; TRINITY_DN48092_c2_g1_i11 3504 3523 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_328176; TRINITY_DN48092_c2_g1_i22 3543 3562 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_328128; TRINITY_DN48092_c2_g1_i1 3420 3439 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_328135; TRINITY_DN48092_c2_g1_i5 3931 3950 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_328161; TRINITY_DN48092_c2_g1_i18 3641 3660 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_328131; TRINITY_DN48092_c2_g1_i2 3927 3946 GCCGCATCAGATGACATTCC BLAST psRNATarget
Ll_transcript_482550; TRINITY_DN49376_c1_g7_i1 180 199 CTCGAGCCAAACAACATTCC BLAST psRNATarget
Ll_transcript_418080; TRINITY_DN46083_c0_g1_i7 45 64 TTTGAACTAGATGACACTTC BLAST psRNATarget
Ll_transcript_418076; TRINITY_DN46083_c0_g1_i4 1511 1530 TTTGAACTAGATGACACTTC BLAST psRNATarget
Ll_transcript_418081; TRINITY_DN46083_c0_g1_i8 1511 1530 TTTGAACTAGATGACACTTC BLAST psRNATarget
Ll_transcript_333150; TRINITY_DN68072_c0_g1_i1 29 48 GATGAATTAGATGACATTCT BLAST psRNATarget
Ll_transcript_354688; TRINITY_DN49443_c3_g1_i7 488 507 ATTGAACCAGACCACATTTG BLAST psRNATarget
Ll_transcript_480226; TRINITY_DN52752_c1_g3_i3 470 489 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_480213; TRINITY_DN52752_c1_g3_i2 1414 1433 GTTGAATCAGATGATGTTCA BLAST psRNATarget
Ll_transcript_400220; TRINITY_DN41119_c0_g1_i1 51 70 ATCGAACAAAACGACATTCT BLAST psRNATarget
Ll_transcript_400221; TRINITY_DN41119_c0_g1_i2 51 70 ATCGAACAAAACGACATTCT BLAST psRNATarget
Ll_transcript_357635; TRINITY_DN45183_c0_g2_i1 565 584 ATCGAACCGGATGGTTTTCC BLAST psRNATarget
Ll_transcript_306314; TRINITY_DN52289_c1_g4_i1 280 299 GTTGAGTCAGGCGATATTTT BLAST psRNATarget
Ll_transcript_306337; TRINITY_DN52289_c1_g4_i2 279 298 GTTGAGTCAGGCGATATTTT BLAST psRNATarget
Ll_transcript_457142; TRINITY_DN49939_c0_g2_i6 1083 1102 GTCGAATCAGATGGTATTAC BLAST psRNATarget
Ll_transcript_311486; TRINITY_DN47115_c3_g1_i5 66 84 GTTGAACCGACGACATTCC BLAST psRNATarget
Ll_transcript_311481; TRINITY_DN47115_c3_g1_i1 66 84 GTTGAACCGACGACATTCC BLAST psRNATarget
Ll_transcript_311483; TRINITY_DN47115_c3_g1_i3 66 84 GTTGAACCGACGACATTCC BLAST psRNATarget
Ll_transcript_311489; TRINITY_DN47115_c3_g1_i8 66 84 GTTGAACCGACGACATTCC BLAST psRNATarget
Ll_transcript_311490; TRINITY_DN47115_c3_g1_i9 66 84 GTTGAACCGACGACATTCC BLAST psRNATarget
Ll_transcript_277708; TRINITY_DN43776_c0_g1_i6 1283 1302 TTAGAGCCGGATGACGTTTC BLAST psRNATarget

Expression of miRNA 173


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)