Transcript | Ll_transcript_88815 |
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CDS coordinates | 1-4668 (+) |
Peptide sequence | VKRDLMLVVERNQAKSDAADAYESILTGRREQKPQDFLDCIIDLREYDVPYHVRFAIDNDIRSGQWYDVGVSNTGVTLEKRTDLLQRAEVRVCAFDIETTKLPLKFPDADYDIIMMISYMVDGQGYLIINRERVGADIEDIEYTPKPEFEGCFKVTNVQNEVQLLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAASHGFKMSDELGFQCDTNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLETGVFRSDIPSSFTLEPSAYEQLINNLDRDLQYAIRVEGKMDLESVSNYDEVKDAIMEKLIKLRDKPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRNLEWVWRGETFTAKKSDYNHVKKQIESEFVEGADDRPSKSFLDLPKSEQQLRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKSSGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKESKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPIKKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFGKFLHGSTLEECYSAVASVANSWLDLLDSQGKDIADSELLDYISESSTMSKSLVDYGEKKSCAVTTARRLADFLGVEMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDADRMKFFVRKWCKVSSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQQVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDLFPKVSRDECLKRHDESDSIRLVRDEEMVNDLEDFGNKTKNSTFGPRPIIRHYEANNERHPLNANCEEGFDQQQNDNNSNDQPLSQNDISCDDVDRTVDYQGWLQIKKRKWKHILERRKKRRLQSSKNSDRVYDTLEQINGKNNQGRSNISSYFRRHEVLLTQYHWQIIQLVHSSQIGQFFAWVVVDGVMVKIPVCVPRVFYLNSRSPITEEFLGKRVNKTLPHGRHSYNLYEVTINEVQFREASKKLAALLADPDVEGIYETKVPLEFKAIIQLGSVCKVDKTAKKRSLQDPWNLSELHMKTTTECVYLEKSIQFFYLYHSISEGRAIYVGYFPVSKVITVVVVNPYQNKDLSPSFLERQFHDGCRALSIEAPPRNDITFKVDYVGYVKDAETVMQRAIDDHRNEHHGPMVAVIECPDVQLVKLGIRALDEFPCLSVPSNARDSQYQILGWQQLAAKIGMQRCAASAQWLNERIAISRYAHVPLGNFELDWLIFTVDTFFSRALHDNQQVLWISDDGLPDLGGISDEETCFVDEVFLIYMWLFSDPILYKT* |
ORF Type | 5prime_partial |
Blastp | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 75.71% of identity |
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Blastx | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 75.58% of identity |
Eggnog | DNA polymerase(COG0417) |
Kegg | Link to kegg annotations (AT1G08260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453891.1) |
Pfam | DNA polymerase family B, exonuclease domain (PF03104.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer