Transcript | Ll_transcript_43837 |
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CDS coordinates | 2-2266 (+) |
Peptide sequence | GYPEYSIETFASMLRDCSDGNCDVFSFTSVMKACGCLGYTDLALQLHGHVIKKLDLGSESCIQNAVVDMYVKCGVVSLAESVFFSIEKPSLFCWNSMIYGYSKFYGARKSLDLFARMPEHDDVSWNTLISVFSQHDLGIQCLSMFVEMWNQGFRPNFMTYGSVFSACASISDLEWGKHLHSRILRMEHSIDAYLGSGLMDMYAKCGCLGLARRVFDGLGERNEVSWTCLITGVAQCGLEEEALALLNQMRQDSVVLDDFTLATVLGVCSGQNYATVGELLHGYAIKSGMDSSVPVGNAIITMYAKCGNTDKASLAFRSMPLRDTISWTAMITAFSQNEDIHRAREYFDTMPERNVITWNSMLSTYVQHGFSEEGLKLYVLMRREGVEPDWITFATSIRACADLAVIKLGIQVVSHATKYALNSDVSVANSIVTMYSRCGQIKEAQKVFDSIYLKNLISWNAMMAAYAQNGLGKQLIETFEDMLKAECKPDHISYISVLSGCSHMGLVEEGKHYFDSMTKVFGISPTREHFACMVDMLARAGLLDQAKNLIDGMPFKPNATIWGALLGGCRIHHDSRLAETAVKNLTELNIEDSGGYVLLANIYTESGELQGVANMRKLIKDKGIQKSPGCSWIEVDNRVHVFTVDDTSHPQIKEVYMKLEEMMKKIEDTGRYIKVASSTHRSQEYHSEKLAFAFGLLNVPSWKPIHVMKNLRVCHDCHLVIKLLSFLTSRELVMRDVYRFHHFKDGFCSCGDYW* |
ORF Type | 5prime_partial |
Blastp | Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 39.42% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At2g13600 from Arabidopsis with 39.42% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT2G13600) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455035.1) |
Pfam | PPR repeat (PF01535.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer