Transcript | Ll_transcript_43270 |
---|---|
CDS coordinates | 148-2112 (+) |
Peptide sequence | MASSETPSPSTPITSAPTAPFSYNNMPQNVINTSHHSSTYSVVQHPLPAMSSHPAPSFKFNIPQTGHAFSSNHHPQSNMNMSDSVAQDVNKVSSASSIPNSVPPHSSNPTRPTYDPNYRPPTSWMPSAPSFPMHHVIPGTPGNPAPPGLTPAPVISSNLSAPSISSDSSSAAVPRQNLPSAAIASDPTLQQKGTPYPSIPVMAASPQGHWLPPPQISGVLRPPFLPYPAAFPGPFPFPARGVTLPAVPVPDSQPPGVTPMSAAGATSASPASSHQLRGTTGFQTEAIPGHADYKKTLNVTQNENPANDQLDAWTAHKTEAGIVYYYNASTGESTYDKPAGFKGEPHQVAVQPTPVSMVNLPGTDWVLVSTSDGKKYYYNNQTKTSCWQIPNEVAELKKKQDGDVRKDHLMSVPNTNVLSDKGPGMVTLNAPAINTGGRDAAALKPSSVQSSSSALDLIKKKLQDSGTPVVSSSIPNSSVGSESNGSKAAESTAKGLQIDNNKDKQKDTNGDANVSDTSSDSEDEDSGPSKEECILQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAVIEGFKKLLDEASEDINHNTDYQTFREKWGDDPRFKALDRKEREHLLSERCHLVF* |
ORF Type | complete |
Blastp | Pre-mRNA-processing protein 40C from Arabidopsis with 52.83% of identity |
---|---|
Blastx | Pre-mRNA-processing protein 40C from Arabidopsis with 51.82% of identity |
Eggnog | transcription elongation regulator(ENOG410XPZW) |
Kegg | Link to kegg annotations (AT3G19840) |
CantataDB | Link to cantataDB annotations (CNT0000254) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413264.1) |
Pfam | WW domain (PF00397.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer