Transcript | Ll_transcript_197803 |
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CDS coordinates | 160-2484 (+) |
Peptide sequence | MAITIQTLEDRYIASCRRHGILPNTTILASFFKAEIKKSCKELCSLEIFIDDLKDIDCAPLLDVCMNLDASEIEAVDIRNESACALNGEYALPLMHAINQKLRVVDLQDLSFGKDFLRDISERGLACQVLILRSSHFRKLNLTGKFMQMHTLDLDFSSSLTSFQEDCFNCMPNLMRLSMCETRITNLWTTVAALSKLPSLVELRFQYWQCCNDAGTSFISPSRKSDSSVDLDLLNRVPFTGESFTDSRVPTDPNFSAEDPLINLYSFNEEVINHDVQSMDEDSSDDSEVDFTSHRHRFWLSDVFPGWNFQVPIQNENEDGEDSSQGHFTGHTTDVSMKYMSCHASPICYEKHYREFMIASLSNLKVLDNLTIRNNDRERASGIYSQYFQYLPYGWKQKESVVNILRKREIKSGHIKVRTSKCRPLNPSGESKYFYTRSLSAAKMGSSTWPSLHPLSLSGCELERGFRPRQFEYHPSDSSLMVLGTLDGEVIVINHENEHIVSYIPSLGAMNSVLGLCWLKQYPSKLIAGSDNGSLKLYDIHHIPRKNTRTHWNSGCVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINNGKRLQVFTDMHSGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIYPCFTNSSSKGNVMVCFSPDDRYILASAVDNEVKQISAADGRLHLVFDIAPTGSSQNYTRSYYMNGRDYIISGSCDEHVVRICCAQTGRRLRDVSLEGKSLGSSMFVQSLRGDPFRVIFIFYWTPYFFLSIFSL* |
ORF Type | complete |
Blastp | Katanin p80 WD40 repeat-containing subunit B1 from Strongylocentrotus with 25.37% of identity |
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Blastx | Snakin-1 from Solanum with 70.42% of identity |
Eggnog | Katanin p80 (WD repeat containing) subunit B 1(ENOG410XQAC) |
Kegg | Link to kegg annotations (373369) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428185.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer