Protein coding transcript 181785

TranscriptLl_transcript_237504
CDS coordinates180-6041 (+)
Peptide sequenceMWTNVFKIPGLHQISWFQFMPHEPDLNPPLPLPDNKSAKVDAAMLQVLSSHLQLQKEGFLTAWTNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHSSLLDNAQPLVSTLRVVASGLWLAPGDSEEVASALSQALRNCIERSLIGLYYMRFGDVFSKFHQLQSEELFRRGHPALEFAFAANEEAIFIHVILSSKHIRMLTTGDLEKVLKHSTEATHGLPVIVSPHGIRGSLTGCSPSDLVKQSYFSSSAKVKASNGIVGLPYHVPQGVGCKLRGQNCHVEVRLGFPRPGTDKASQQNKNNVRNLTKFNAAESLVVGQSDHKGSPNHLSDYEKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPGSLSFIHCAGNLDNSEDPWTEINGTRTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSVLSSGDQLQSDGLKLGSKRSRTGVTESLSTATNVIVQDAYMSDVGSMEVNNSAITVGNEPIGSYWNWDDDDRDPVMDIGALLSEFGDFGDFFVNDVLPFGEPPGTAESQALVFSAPDCGDVNSSPVGVMDVSDQTLLPVGFTSFESFNPPPSIAMEECLSKNQDNLNNSMSSVPVNQTQISCTREVEHIMKAEAMMIFTAEFGAVETPTSDLSTLFTSPYFPKSRKAESSNSSSNNYLYGAAPPSTPYIDGSEGKNGMVATTKTICGKHDASTSLHPRNYYNYVESRKDINDRKPANLNDNVNGKSEGMVQPLFSNIGSNAVTKSVLRKMSEGTHETEHFLLSAKTLLATDVTCVMLQASMCRLRHILLSSSNLMPVGLSRSTGATFFNQLPGDPSTTTDNISNKYEVKKKENIPVRIAGDIDGGMLDGHQNAPVGVWRTVGVSKVVKSSNSPNMEVGPSFSHTSFNEDGMLSYSQRKPLQELLDGIPLLVQQAISFVDLALDADWGDGPYGLLALQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGVELLDPLSADVHASTVISLLQSDVKTALKSAFSNLEGPLSVTDWCKGRNQLVDAGSIVDGVSAESSISECRDSSEPMSPSQSSVAGSSIIKGSSMMDSAKVDEISQRRIGQDICSSESERQPCSRLKPTLTALPFPSILMGYQDDWLKTSANCLQYWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQVLGNQMEIESGKLSSSGFVLLDCPQSMKIESSHASLVGSISDYFLSLSNGWDLTSYLKSLSKALRALKLSSCLSTNPTEGSNSSCMVIYVVCPFPDPTAILQTVIESSVAIGSVIQQSDREKRSTLHSQVLKALSGLATVDEASASNILVLSGFSIPKLVLQIVTVDAIFRVTGPSVSELAILKETAFTVYSKARRISRGISSDFPLSAFSGRSHSVLTQMPSPISGMWKDSVGPRIVGHSLPREGDIDASLRSGGWDNSWQPTRSAGLNCDPSRSGDTFFHDEIRYMFEPLFILAEPGSLDHGTSVIGSPTSESSKTLGDDSSGSYMQQSTSTAGSMDSASSIDGLGSDQKTPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFAQVLQQGCLILQSCDTSLAKPRDFVIARIGGFYELEYLEWQKAIYSFGGSEMKRWPLQLRKYMSDGVSITSNGSSLQQPEMSLIPERTLPSSPSPLYSPHTKATGFMKGGSLGQSAVRKQHMGGHSMVDNNSRGLLHWAQSISFVAVSMDHTLQLVLPASDSSGYTEGFTPVKSLGSTSCAYVVIPSPSMRFLPPTALQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDHRSNLKEEWPSVLSVSLIDYYGVANIRGINNKQQGGGRSLSWETKDFETETHLVLETLAAELHALSWMTVSPTYIERRTSLPFHCDMVLRLRRLLHFADKELSKKSEKS*
ORF Typecomplete

Annotations of Ll_transcript_237504

BlastpMediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.31% of identity
BlastxMediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.23% of identity
Eggnog-
KeggLink to kegg annotations (AT1G55325)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438261.1)
PfamMediator complex subunit 13 C-terminal (PF06333.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer