Transcript | Ll_transcript_18448 |
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CDS coordinates | 626-5731 (+) |
Peptide sequence | MALFLMTWSLVLVLYQQCNTASLQQMVDSYIIFISQQSDLNSSIKSEELPLPGFYDTDFSSRIPWTWFNPAHIRIAPFPTREYTDDQFQSIVKEVMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGIFHISWFITYALQFAISSGIITACTMGSLFKYSDKTLVFVYFFTFGLSAITMSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMFLKVIASFLSPVAFALGSVNFADYERAHVGLRWSNIWRESSGVNFLICLLMMIFDTLLYCVIGLYFDKVLPREYGLRYPWTFPFQKDFWRKKKFVKHGSSSFEVKISGDNSESKGNLLGKDTSKSAIEAISIDMKQQELDGRCIKIRNLHKVYSTKKGDCCAVNSLHLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKILGVCPQHDILFPELTVREHLELFAILKGVEEDSLEGVVTSMADEVGLADKISSVVRALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSINCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRHVPSATCVSEVGTEISFRLPLASSPAFEGMFREIERSMKKSGSNVGLSGSSDNDSLGIESYGISVTTLEEVFLRVAGCDYNEAECLEENNHSLLSDSVASLASYDRPSKTICYPEVFGNYKIFGFLACMVGRVCGLIFAMLISFINFLGMQCCSCGIITRSTFWQHSKALFIKKAITARRDTKTIIFQLMIPAVFLFFGLLFLKLKPHPDQQGLTLSTSYFNPLLSGGGGGCPIPFNLSLPIAEKVAQNVEGGWIQRFKPSSYKFPNSESALADAVEAAGPTLGPALISMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLGYTVLHNFSCQHAAPAFINLMNAAILRLATHDVNMTIQTRNHPLPMTQSQRVQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWTSTFIWDFLSFLFPATFSIVLFYIFGLDQFTGGVSLLPTILMLLEYGLAIASSTYCLTFFFYDHTMAQNVVLLVHFFTGLILMVISFIMGLIPSTISANSLLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGAAICYLAVESFIYFLLTLVLEIFPALKFTPFMIKKWWENINIFQHNTTYLEPLLEPSSGNVDKDLDEDVDVKTERNRVLSGSVDNSIIYLRNLRKVYSEEKYHEKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSNPKAARRYIGYCPQFDALLEYLTVKEHLELYARIKGVPDCTIDNVVMEKLLEFDLVKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLHALCQAIQERLFDVPSYPRTLLNDLEICIGGTDSITSEDTSIAEISLTREMIALIGLWLDNEERIKTLISCTPVSDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARYQGCNGLNIRYQLPYDEDLSLADVFGVLEGNRNRLGIAEYSISQSTLETIFNHFAAKS* |
ORF Type | complete |
Blastp | ABC transporter A family member 1 from Arabidopsis with 71.32% of identity |
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Blastx | ABC transporter A family member 1 from Arabidopsis with 71.34% of identity |
Eggnog | (ABC) transporter(COG1131) |
Kegg | Link to kegg annotations (AT2G41700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444053.1) |
Pfam | ABC-2 family transporter protein (PF12698.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer