Transcript | Ll_transcript_392268 |
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CDS coordinates | 3-2540 (+) |
Peptide sequence | SSSSSSSYYYSSVSPSFTQNVVADSFKTWFKSSTTRDPLLHRISHIISSTDEFSGALSSLPLPPLTEPFVLSVLRHLSSSATSHRHVLSSLKFFDWAGHQPGYHHSRATFTAIFRILSNANLMPLILDFLHTFRKRRYAHRVRFNDTLVIGYAIAGKPEIALHVFGKMRFQGLDLDTFGYHVLLNALVEQNYFNAFEVIAKQIRLRGYENHVTDAIVIKSLCKQGRLDDAEAYFNGLVSSEKELDGSEVSVLVSAFCQNNRFDKAIRFVREFGEMGLVPLDNAYGVWIRGLVCGGRLDEALQFFWQKKDEEGYVPGSVRYNILIWRLLRENRLRDVYDLLMDMNETSTPPDMVTMNAVMCFFCKAGMVDVALELYNSRSQFGLSPNHMAYKYLILTLCWDGCVKEAYSVLKSSVGQGYFPDKRTFSTLASALCRECKIDEMKELLHLALSRNIMPNSSTYDKFISALCQAGRVEDGYLMHGELNNETARMSYYTKMIMGFKKLKRGDIAARLLVEMKGKGYILTRPLFRAVLCCLLEMDNPNAKFFNLLEMLSRHGNHCQVYNCFIEGAGLSKKADMARQVFELMQRNGVEPDMSSQVLMLKSYLKSESISEALSFFHNLRCQGIVSRKLFNTLIVGLCKSNKVDIAREFLFEMIKAELNPSIECYEVLVQQLCSSQRYRDAINVVNLYEKMGRRLTSFIGNVLLYHSLISRELYDACAQLRGVGDGEFSGSSMLTLIIGAFSGHLRVNHFIEDLEELISKCFPLDIYTYNLLLRKASHGDMDQAFELFSRMCQRGYEPNWWTYDVMVHGFSKHGRQDEAKRWVEEMSQRGLYPKESTRRRRTFV* |
ORF Type | 5prime_partial |
Blastp | Pentatricopeptide repeat-containing protein At1g71210, mitochondrial from Arabidopsis with 43.78% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At1g71210, mitochondrial from Arabidopsis with 43.47% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT1G71210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434547.1) |
Pfam | PPR repeat (PF01535.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer