Transcript | Ll_transcript_1774 |
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CDS coordinates | 158-3589 (+) |
Peptide sequence | MQWLAVRNGVVLLPRLRSFALFLSSPTPSTSIPFIPSRMFKGQPEQVLCFTDRKVVRGSSKAAKKHKAQNIVLDDKNLSHILWWKERMEIFRKPSTIQLLRRLEYSNLLGLDTNLKNGSLKEGTLNWEILQFKSRFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGFSVCIVEEVQGPAQARGRKDRFISGHAHPGNPYVYGLVGVDHDLDFPEPMPVVGISRSARGYCIILVLETMKTYSSEDSLTEEAVVTKLRTCHYHHLFIHTSLRKNSSGTFRWSEYGEGGLLWGECSSKYFEWFDGNPVSEILFKVKELYGLDDEVIFRNTTVPLENRPRPLTLGTATQIGVIPTEGIPSLLKVILPSNCTGLPLLYVRDLLLNPPSYEIASTIQATCKLMSSVTCSIPEFTCVPSAKLVKLIESKEANHIEFCRIKNVLDEILKMYRTIELNEILELLTHPTWVATGLKLDFETLVNGCEVASSKIGEIISLDGEDDQKVSFFSAIPNDFFENMEFSWKGRVKRVHIDDAFAEVEKAAEALHFAVTEDFSPIVSRIKATSSPLGGPKGEILYAREHEAVWFKGKRFTPIVWAGSPGEEQIKQLKPALDSKGKRAGEEWFTTMKVEAALIRYHQACAKAKSKVLEILRELSAELQSDINIIVFASMLLVIAKALFSHVSEGRRRKWVFPALAESHGFEDVKQLEENQGMKIVGLLPYWLNTAEGGAVHNTVDMQSLFLLTGPNGGGKSSILRSLCAAALLGVCGLTVPAESALMPCFDSIMLHMKSYDSPADEKSSFQVEMSELRSIIAGTSKRSLVLIDEICRGTETAKGTCIAGSIIETLDQIGCLGIVSTHLHGIFTLPLNIKNTVYKAMGTVCIDGQTKPTWKLIDGICKESLAFETAKREGMPESIIERAEELYLSHAKELLPGENCPKQKQYSYDINVNNSNGTHLNSRMFMPGTSHDRISLANQVEDLHKKVESAVTEICHKKVMELQRNKIISELTEIKCVLISAREQPPPSTVGSSSVYVIVRPDKKLYVGQTDDLEGRVRSHRLKEGLQNASFLYFLVPGKSLACELETLLINQLPSQGFQLANVADGKHRNFGTSNLHTECVATS* |
ORF Type | complete |
Blastp | DNA mismatch repair protein MSH1, mitochondrial from Arabidopsis with 67.55% of identity |
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Blastx | DNA mismatch repair protein MSH1, mitochondrial from Arabidopsis with 67.17% of identity |
Eggnog | that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249) |
Kegg | Link to kegg annotations (AT3G24320) |
CantataDB | Link to cantataDB annotations (CNT0002490) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428545.1) |
Pfam | MutS domain I (PF01624.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer