Transcript | Ll_transcript_1779 |
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CDS coordinates | 3-2291 (+) |
Peptide sequence | LVLIIMYGPSYEFLSLFVMTFRYVRDLLLNPPSYEIASTIQATCKLMSSVTCSIPEFTCVPSAKLVKLIESKEANHIEFCRIKNVLDEILKMYRTIELNEILELLTHPTWVATGLKLDFETLVNGCEVASSKIGEIISLDGEDDQKVSFFSAIPNDFFENMEFSWKGRVKRVHIDDAFAEVEKAAEALHFAVTEDFSPIVSRIKATSSPLGGPKGEILYAREHEAVWFKGKRFTPIVWAGSPGEEQIKQLKPALDSKGKRAGEEWFTTMKVEAALIRYHQACAKAKSKVLEILRELSAELQSDINIIVFASMLLVIAKALFSHVSEGRRRKWVFPALAESHGFEDVKQLEENQGMKIVGLLPYWLNTAEGGAVHNTVDMQSLFLLTGPNGGGKSSILRSLCAAALLGVCGLTVPAESALMPCFDSIMLHMKSYDSPADEKSSFQVEMSELRSIIAGTSKRSLVLIDEICRGTETAKGTCIAGSIIETLDQIGCLGIVSTHLHGIFTLPLNIKNTVYKAMGTVCIDGQTKPTWKLIDGICKESLAFETAKREGMPESIIERAEELYLSHAKELLPGENCPKQKQYSYDINVNNSNGTHLNSRMFMPGTSHDRISLANQVEDLHKKVESAVTEICHKKVMELQRNKIISELTEIKCVLISAREQPPPSTVGSSSVYVIVRPDKKLYVGQTDDLEGRVRSHRLKEGLQNASFLYFLVPGKSLACELETLLINQLPSQGFQLANVADGKHRNFGTSNLHTECVATS* |
ORF Type | 5prime_partial |
Blastp | DNA mismatch repair protein MSH1, mitochondrial from Arabidopsis with 66.3% of identity |
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Blastx | DNA mismatch repair protein MSH1, mitochondrial from Arabidopsis with 66.3% of identity |
Eggnog | that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)(COG0249) |
Kegg | Link to kegg annotations (AT3G24320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428545.1) |
Pfam | MutS domain V (PF00488.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer