Transcript | Ll_transcript_1048 |
---|---|
CDS coordinates | 173-1561 (+) |
Peptide sequence | MVVDFDSTTRRVEVDNRIPLHYYYRIADNLLKQATIYREEKNIVDLYIILIRYLSLVSETIPYHRDYQVSLPKGRAAHKKRSLAVLDEVESLKPEFKRRWEKLNDSWGKASFPEGNGFNKALESSTGSSLEHPSVNKSYTLSMDFKQPVRLGSHPSWKYNNNMLTSNSMPIDKQFQKLSVGLPPPKKETLSRHSFLGPNGLQGQWLGPSTEIKVQYPSSNDLILDKDSSLNQAGQYELVAVKDGDQGPVTSTLESILSLDDGRWLRPAVESCSPVLTELREDPFQLLNIKQPLPPPVLAQVYPEHAPIPPSKVADPRPGPAKSSQDSGVGPTTYQHLHIPIKMMEDFLRLASGNTRKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEIQDSLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAVAIVMAPTDTERFVSCIHKS* |
ORF Type | complete |
Blastp | AMSH-like ubiquitin thioesterase 3 from Arabidopsis with 61.95% of identity |
---|---|
Blastx | AMSH-like ubiquitin thioesterase 3 from Arabidopsis with 61.95% of identity |
Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310) |
Kegg | Link to kegg annotations (AT4G16144) |
CantataDB | Link to cantataDB annotations (CNT0000606) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455986.1) |
Pfam | USP8 dimerisation domain (PF08969.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer