miRNA 186 details

Id Micro186
SequenceGGGGCGGACTGGGAACACATG 
Annotated nameszma-miR398b-5p; 
Annotated pre-miRNANone

Targets of miRNA 186

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_40788; FTRINITY_DN46769_c0_g1_i1 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_40789; FTRINITY_DN46769_c0_g1_i2 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_119255; FTRINITY_DN58234_c3_g2_i3 1587 1607 CATGTGTTCTTGGTCTGTTCC BLAST psRNATarget
Ll_transcript_119253; FTRINITY_DN58234_c3_g2_i2 1650 1670 CATGTGTTCTTGGTCTGTTCC BLAST psRNATarget
Ll_transcript_119252; FTRINITY_DN58234_c3_g2_i1 1587 1607 CATGTGTTCTTGGTCTGTTCC BLAST psRNATarget
Ll_transcript_256041; FTRINITY_DN59194_c1_g2_i1 105 125 TGTGTGTTTTCAGTTTGCTTC BLAST psRNATarget
Ll_transcript_229575; FTRINITY_DN52741_c2_g2_i1 1988 2008 GATGTGTCCCTAGTTTGTCCC BLAST psRNATarget
Ll_transcript_20673; FTRINITY_DN55127_c0_g1_i12 216 236 TCTGTGTTCTTAGTCCTCTCC BLAST psRNATarget
Ll_transcript_20665; FTRINITY_DN55127_c0_g1_i8 216 236 TCTGTGTTCTTAGTCCTCTCC BLAST psRNATarget
Ll_transcript_44161; FTRINITY_DN54154_c0_g1_i2 1625 1645 ATTGTTTTTCCAGTCCCCCCC BLAST psRNATarget
Ll_transcript_44180; FTRINITY_DN54154_c0_g1_i11 2546 2566 ATTGTTTTTCCAGTCCCCCCC BLAST psRNATarget
Ll_transcript_44178; FTRINITY_DN54154_c0_g1_i10 2546 2566 ATTGTTTTTCCAGTCCCCCCC BLAST psRNATarget
Ll_transcript_44478; FTRINITY_DN54194_c0_g4_i5 4004 4024 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_44490; FTRINITY_DN54194_c0_g4_i9 4341 4361 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_44484; FTRINITY_DN54194_c0_g4_i7 4425 4445 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_273639; FTRINITY_DN54263_c0_g1_i6 227 247 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_273626; FTRINITY_DN54263_c0_g1_i2 1124 1144 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_108571; FTRINITY_DN50735_c0_g2_i7 218 238 TATGTTTTTTTAGTCTGCTCC BLAST psRNATarget
Ll_transcript_273644; FTRINITY_DN54263_c0_g1_i8 1124 1144 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_273643; FTRINITY_DN54263_c0_g1_i7 1106 1126 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_108567; FTRINITY_DN50735_c0_g2_i3 218 238 TATGTTTTTTTAGTCTGCTCC BLAST psRNATarget
Ll_transcript_273632; FTRINITY_DN54263_c0_g1_i4 1106 1126 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_273636; FTRINITY_DN54263_c0_g1_i5 1106 1126 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_273646; FTRINITY_DN54263_c0_g1_i9 1194 1214 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_273623; FTRINITY_DN54263_c0_g1_i1 1220 1240 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_273630; FTRINITY_DN54263_c0_g1_i3 1106 1126 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_6988; FTRINITY_DN58576_c3_g4_i1 71 91 AGTGTGTTTCTAGTTTGCTCA BLAST psRNATarget
Ll_transcript_174231; FTRINITY_DN52108_c0_g1_i4 649 669 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174237; FTRINITY_DN52108_c0_g1_i10 750 770 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174245; FTRINITY_DN52108_c0_g1_i17 1486 1506 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174232; FTRINITY_DN52108_c0_g1_i5 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174233; FTRINITY_DN52108_c0_g1_i6 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174230; FTRINITY_DN52108_c0_g1_i3 1486 1506 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174234; FTRINITY_DN52108_c0_g1_i7 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174238; FTRINITY_DN52108_c0_g1_i11 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174228; FTRINITY_DN52108_c0_g1_i1 1486 1506 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_174229; FTRINITY_DN52108_c0_g1_i2 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_166962; FTRINITY_DN57322_c0_g3_i3 3504 3524 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_58303; FTRINITY_DN57805_c4_g1_i1 1328 1348 TATGAGTCCCAAGTCCGCCCC BLAST psRNATarget
Ll_transcript_58316; FTRINITY_DN57805_c4_g1_i14 1428 1448 TATGAGTCCCAAGTCCGCCCC BLAST psRNATarget
Ll_transcript_58314; FTRINITY_DN57805_c4_g1_i12 2047 2067 TATGAGTCCCAAGTCCGCCCC BLAST psRNATarget
Ll_transcript_58315; FTRINITY_DN57805_c4_g1_i13 2333 2353 TATGAGTCCCAAGTCCGCCCC BLAST psRNATarget
Ll_transcript_58306; FTRINITY_DN57805_c4_g1_i4 2460 2480 TATGAGTCCCAAGTCCGCCCC BLAST psRNATarget
Ll_transcript_15044; FTRINITY_DN59256_c1_g1_i4 117 137 TCTGTGTTTCTGGTCCGCATC BLAST psRNATarget
Ll_transcript_15037; FTRINITY_DN59256_c1_g1_i2 117 137 TCTGTGTTTCTGGTCCGCATC BLAST psRNATarget
Ll_transcript_422605; TRINITY_DN47985_c1_g3_i4 127 147 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_322986; TRINITY_DN38895_c0_g1_i1 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_422599; TRINITY_DN47985_c1_g3_i1 127 147 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_322987; TRINITY_DN38895_c0_g1_i2 145 165 CATGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_304457; TRINITY_DN52207_c7_g2_i1 1596 1616 CATGTGTTCTTGGTCTGTTCC BLAST psRNATarget
Ll_transcript_304459; TRINITY_DN52207_c7_g2_i2 1595 1615 CATGTGTTCTTGGTCTGTTCC BLAST psRNATarget
Ll_transcript_452102; TRINITY_DN40791_c0_g2_i2 148 168 TGTGTGTTTTCAGTTTGCTTC BLAST psRNATarget
Ll_transcript_398226; TRINITY_DN51909_c3_g1_i14 271 291 TCTGTGTTCTTAGTCCTCTCC BLAST psRNATarget
Ll_transcript_398215; TRINITY_DN51909_c3_g1_i7 271 291 TCTGTGTTCTTAGTCCTCTCC BLAST psRNATarget
Ll_transcript_398213; TRINITY_DN51909_c3_g1_i5 271 291 TCTGTGTTCTTAGTCCTCTCC BLAST psRNATarget
Ll_transcript_398221; TRINITY_DN51909_c3_g1_i11 271 291 TCTGTGTTCTTAGTCCTCTCC BLAST psRNATarget
Ll_transcript_398209; TRINITY_DN51909_c3_g1_i3 271 291 TCTGTGTTCTTAGTCCTCTCC BLAST psRNATarget
Ll_transcript_296273; TRINITY_DN51700_c0_g1_i1 1621 1641 ATTGTTTTTCCAGTCCCCCCC BLAST psRNATarget
Ll_transcript_296287; TRINITY_DN51700_c0_g1_i14 1621 1641 ATTGTTTTTCCAGTCCCCCCC BLAST psRNATarget
Ll_transcript_296278; TRINITY_DN51700_c0_g1_i6 2624 2644 ATTGTTTTTCCAGTCCCCCCC BLAST psRNATarget
Ll_transcript_296285; TRINITY_DN51700_c0_g1_i12 2624 2644 ATTGTTTTTCCAGTCCCCCCC BLAST psRNATarget
Ll_transcript_422598; TRINITY_DN47985_c1_g2_i1 2261 2281 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_422607; TRINITY_DN47985_c1_g2_i3 2472 2492 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_422602; TRINITY_DN47985_c1_g2_i2 3203 3223 CATGTGTTCTCAGTACGACCC BLAST psRNATarget
Ll_transcript_422603; TRINITY_DN47985_c1_g3_i3 127 147 CACGTGTTCTCAGGTCGCCCC BLAST psRNATarget
Ll_transcript_379414; TRINITY_DN50731_c0_g1_i19 1159 1179 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_379412; TRINITY_DN50731_c0_g1_i17 1159 1179 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_379401; TRINITY_DN50731_c0_g1_i6 1239 1259 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_379396; TRINITY_DN50731_c0_g1_i1 1159 1179 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_379415; TRINITY_DN50731_c0_g1_i20 1159 1179 TATGTTTTCCTAGTCCGTTTT BLAST psRNATarget
Ll_transcript_515609; TRINITY_DN50837_c1_g2_i3 223 243 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_426491; TRINITY_DN45511_c0_g1_i8 750 770 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_515603; TRINITY_DN50837_c1_g2_i1 102 122 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_426487; TRINITY_DN45511_c0_g1_i4 948 968 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_515611; TRINITY_DN50837_c1_g2_i5 223 243 AAGGTGTTCTCAGTTCGGCCC BLAST psRNATarget
Ll_transcript_426501; TRINITY_DN45511_c0_g1_i18 992 1012 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426492; TRINITY_DN45511_c0_g1_i9 1486 1506 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426484; TRINITY_DN45511_c0_g1_i1 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426485; TRINITY_DN45511_c0_g1_i2 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426488; TRINITY_DN45511_c0_g1_i5 1395 1415 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426498; TRINITY_DN45511_c0_g1_i15 1486 1506 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426494; TRINITY_DN45511_c0_g1_i11 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426500; TRINITY_DN45511_c0_g1_i17 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426497; TRINITY_DN45511_c0_g1_i14 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426493; TRINITY_DN45511_c0_g1_i10 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426490; TRINITY_DN45511_c0_g1_i7 1486 1506 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_426503; TRINITY_DN45511_c0_g1_i20 1684 1704 TTATTGTTCCCAGTCTGCTCT BLAST psRNATarget
Ll_transcript_487165; TRINITY_DN52304_c0_g1_i2 1458 1478 GCAGTGTTCCTAGTTTGCTTC BLAST psRNATarget
Ll_transcript_286553; TRINITY_DN48891_c0_g1_i7 1417 1437 TATGAGTCCCAAGTCCGCCCC BLAST psRNATarget
Ll_transcript_487359; TRINITY_DN52368_c0_g2_i6 132 152 TCTGTGTTTCTGGTCCGCATC BLAST psRNATarget
Ll_transcript_487353; TRINITY_DN52368_c0_g2_i2 132 152 TCTGTGTTTCTGGTCCGCATC BLAST psRNATarget

Expression of miRNA 186


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)