Transcript | Ll_transcript_157889 |
---|---|
CDS coordinates | 172-2268 (+) |
Peptide sequence | MAQSSDSNSVPNRRLPCDSDGVCMLCKTKPTAVVDTLTCNTCITPWHLPCLPLPDRPPTMSDAQNWCCPDCAAPAAVTHPLPHPSSDDPSSQLMASIRAIQEDDSLTDQQKAKKRMEIMLASSNIADSSNPSSSAPPGVNAALDIFDGSFNCSICMQLPERPVTTPCGHNFCLKCFQKCFSQGNRTCANCRGAIPLKMATNPRINSQLAFAIRLAKMARSGCAVPAGVPKVYHFIHNQDRPDTAFTTERAKKTGLANACSGKIFVTVPPDHFGPIPAENDPTRNRGVLVGDTWMNRMDCRQWGAHLPHVAGIAGQSAYGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQQFENMNEALRLSCLKGYPVRVVRSSKEKRSAYAPDEGVRYDGVYRIEKCWRKVGQQGCKVCRYLFVRCDNEPAPWTSDECGDKPRPLPKIKELQGAVDLTERKAAPSWDFDGEKGCWLWKRPPPESKKSAGTVSPVKGQIRAVKRKVKVASVKDKLLKEFACQICRKVMCNPLTTPCAHNFCKACLEGAFSGQSFIRKRAVQSGRSLRAQKNVMKCPSCQNDIAEYLQNPQVNRQMMGIIESLQSEAEQLAENSSESSDKNDENQKNESDVSEPCEEEEDGDDDDDSSEKVLEEVKDNDLNLPPQKRRKVAKGAVVVTEEEHIDEVEQDSVKACA* |
ORF Type | complete |
Blastp | E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 60.71% of identity |
---|---|
Blastx | E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 60.66% of identity |
Eggnog | ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase(COG3440) |
Kegg | Link to kegg annotations (AT1G57820) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435773.1) |
Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer