miRNA 187 details

Id Micro187
SequenceGGGTAAGATCTCTATTGGCAGG 
Annotated namesaly-miR399a-5p; 
Annotated pre-miRNANone

Targets of miRNA 187

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_273303; FTRINITY_DN54235_c2_g2_i4 546 567 AGTGTCAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_219375; FTRINITY_DN56314_c2_g4_i2 65 86 AGTGTCAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_273314; FTRINITY_DN54235_c2_g2_i13 2170 2191 AGTGTCAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_273299; FTRINITY_DN54235_c2_g2_i2 2172 2193 AGTGTCAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_219366; FTRINITY_DN56314_c2_g3_i1 399 420 AGTGTTAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_189076; FTRINITY_DN56738_c2_g1_i17 2222 2243 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189088; FTRINITY_DN56738_c2_g1_i28 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189084; FTRINITY_DN56738_c2_g1_i25 2183 2204 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189068; FTRINITY_DN56738_c2_g1_i11 2235 2256 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189055; FTRINITY_DN56738_c2_g1_i2 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189054; FTRINITY_DN56738_c2_g1_i1 2183 2204 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189093; FTRINITY_DN56738_c2_g1_i33 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189080; FTRINITY_DN56738_c2_g1_i21 2183 2204 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189070; FTRINITY_DN56738_c2_g1_i13 2235 2256 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189078; FTRINITY_DN56738_c2_g1_i19 2235 2256 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189082; FTRINITY_DN56738_c2_g1_i23 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_189061; FTRINITY_DN56738_c2_g1_i5 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_110862; FTRINITY_DN55469_c0_g1_i6 302 323 ACTGTCAATCGAGATCTTACCT BLAST psRNATarget
Ll_transcript_110864; FTRINITY_DN55469_c0_g1_i7 302 323 ACTGTCAATCGAGATCTTACCT BLAST psRNATarget
Ll_transcript_45214; FTRINITY_DN54116_c4_g2_i1 764 785 TATGCTAGCAGAGATCTTATCC BLAST psRNATarget
Ll_transcript_45215; FTRINITY_DN54116_c4_g2_i2 1803 1824 TATGCTAGCAGAGATCTTATCC BLAST psRNATarget
Ll_transcript_175576; FTRINITY_DN34126_c0_g1_i1 391 412 GCTGCTATTAGAGATGTTACCC BLAST psRNATarget
Ll_transcript_135308; FTRINITY_DN58063_c3_g1_i2 2005 2026 AAGAACAATAGAGATCTTACCA BLAST psRNATarget
Ll_transcript_128350; FTRINITY_DN53483_c6_g3_i17 957 978 AGAACCAATGGAGATTTTACCG BLAST psRNATarget
Ll_transcript_128346; FTRINITY_DN53483_c6_g3_i14 1060 1081 AGAACCAATGGAGATTTTACCG BLAST psRNATarget
Ll_transcript_128340; FTRINITY_DN53483_c6_g3_i9 1392 1413 AGAACCAATGGAGATTTTACCG BLAST psRNATarget
Ll_transcript_207952; FTRINITY_DN52696_c1_g1_i5 794 815 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_207956; FTRINITY_DN52696_c1_g1_i9 958 979 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_207950; FTRINITY_DN52696_c1_g1_i3 1471 1492 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_45257; FTRINITY_DN54158_c0_g1_i2 1778 1799 CACACCAATAGAGGTTTTATCT BLAST psRNATarget
Ll_transcript_45258; FTRINITY_DN54158_c0_g1_i3 1883 1904 CAGACCAATAGAGGTTTTATCT BLAST psRNATarget
Ll_transcript_45256; FTRINITY_DN54158_c0_g1_i1 1964 1985 CAGACCAATAGAGGTTTTATCT BLAST psRNATarget
Ll_transcript_207948; FTRINITY_DN52696_c1_g1_i1 2378 2399 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_218547; FTRINITY_DN56334_c0_g3_i3 2290 2311 TCAGCAGATGGAGATCTTATTC BLAST psRNATarget
Ll_transcript_218545; FTRINITY_DN56334_c0_g3_i2 2381 2402 TCAGCAGATGGAGATCTTATTC BLAST psRNATarget
Ll_transcript_218539; FTRINITY_DN56334_c0_g3_i1 2552 2573 TCAGCAGATGGAGATCTTATTC BLAST psRNATarget
Ll_transcript_121343; FTRINITY_DN62180_c0_g1_i1 63 84 AGTGCCAATAGGGGTCTTGATC BLAST psRNATarget
Ll_transcript_175835; FTRINITY_DN48914_c0_g1_i1 1798 1819 CTTGAAAATAGAGGTTTTACTC BLAST psRNATarget
Ll_transcript_248967; FTRINITY_DN55990_c1_g1_i8 394 415 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_248974; FTRINITY_DN55990_c1_g1_i12 394 415 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_248970; FTRINITY_DN55990_c1_g1_i10 1493 1514 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_248962; FTRINITY_DN55990_c1_g1_i5 1493 1514 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_98634; FTRINITY_DN57151_c0_g1_i2 1767 1788 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98638; FTRINITY_DN57151_c0_g1_i6 1801 1822 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98645; FTRINITY_DN57151_c0_g1_i11 1865 1886 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98635; FTRINITY_DN57151_c0_g1_i3 1886 1907 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98639; FTRINITY_DN57151_c0_g1_i7 1767 1788 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98633; FTRINITY_DN57151_c0_g1_i1 1780 1801 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98641; FTRINITY_DN57151_c0_g1_i9 1801 1822 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98636; FTRINITY_DN57151_c0_g1_i4 1865 1886 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_98640; FTRINITY_DN57151_c0_g1_i8 1886 1907 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_259932; FTRINITY_DN57921_c0_g1_i17 1898 1919 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_259923; FTRINITY_DN57921_c0_g1_i9 1931 1952 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_259935; FTRINITY_DN57921_c0_g1_i20 1980 2001 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_41857; FTRINITY_DN87360_c0_g1_i1 76 97 CTAGTTAATAGAGATTTAACCT BLAST psRNATarget
Ll_transcript_99464; FTRINITY_DN57198_c1_g3_i4 180 201 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_189718; FTRINITY_DN56706_c4_g7_i1 32 53 AGCACCAGTAGAGATTTTATCA BLAST psRNATarget
Ll_transcript_32503; FTRINITY_DN58402_c4_g3_i3 143 163 ACTGCAATAGGGATCTTATCT BLAST psRNATarget
Ll_transcript_99462; FTRINITY_DN57198_c1_g3_i3 7155 7176 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_99453; FTRINITY_DN57198_c1_g3_i1 7176 7197 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_99456; FTRINITY_DN57198_c1_g3_i2 7334 7355 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_311066; TRINITY_DN47157_c1_g1_i6 514 535 AGTGTCAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_311058; TRINITY_DN47157_c1_g1_i5 516 537 AGTGTCAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_311041; TRINITY_DN47157_c1_g2_i1 399 420 AGTGTTAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_311042; TRINITY_DN47157_c1_g2_i2 657 678 AGTGTTAATGGAGATTTTACCC BLAST psRNATarget
Ll_transcript_289184; TRINITY_DN51379_c0_g1_i18 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_289180; TRINITY_DN51379_c0_g1_i14 2183 2204 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_289173; TRINITY_DN51379_c0_g1_i7 2254 2275 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_289174; TRINITY_DN51379_c0_g1_i8 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_289183; TRINITY_DN51379_c0_g1_i17 2167 2188 GTAGCCAATGGAGGTTTTGCCC BLAST psRNATarget
Ll_transcript_281050; TRINITY_DN39686_c0_g1_i1 104 125 ACTGTCAATCGAGATCTTACCT BLAST psRNATarget
Ll_transcript_281051; TRINITY_DN39686_c0_g1_i2 104 125 ACTGTCAATCGAGATCTTACCT BLAST psRNATarget
Ll_transcript_417510; TRINITY_DN46072_c4_g1_i13 2275 2296 TATGCTAGCAGAGATCTTATCC BLAST psRNATarget
Ll_transcript_417513; TRINITY_DN46072_c4_g1_i16 2320 2341 TATGCTAGCAGAGATCTTATCC BLAST psRNATarget
Ll_transcript_417498; TRINITY_DN46072_c4_g1_i2 3314 3335 TATGCTAGCAGAGATCTTATCC BLAST psRNATarget
Ll_transcript_417502; TRINITY_DN46072_c4_g1_i6 3506 3527 TATGCTAGCAGAGATCTTATCC BLAST psRNATarget
Ll_transcript_417499; TRINITY_DN46072_c4_g1_i3 4545 4566 TATGCTAGCAGAGATCTTATCC BLAST psRNATarget
Ll_transcript_527131; TRINITY_DN47591_c0_g1_i4 822 843 CACACCAATAGAGGTTTTATCT BLAST psRNATarget
Ll_transcript_501117; TRINITY_DN47339_c5_g2_i3 919 940 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_508392; TRINITY_DN48196_c5_g2_i1 101 122 AAGGTCAATGGAGGTCTTGTTC BLAST psRNATarget
Ll_transcript_527130; TRINITY_DN47591_c0_g1_i3 1805 1826 CACACCAATAGAGGTTTTATCT BLAST psRNATarget
Ll_transcript_527129; TRINITY_DN47591_c0_g1_i2 1914 1935 CAGACCAATAGAGGTTTTATCT BLAST psRNATarget
Ll_transcript_527128; TRINITY_DN47591_c0_g1_i1 1914 1935 CACACCAATAGAGGTTTTATCT BLAST psRNATarget
Ll_transcript_501124; TRINITY_DN47339_c5_g2_i7 1951 1972 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_501122; TRINITY_DN47339_c5_g2_i6 2172 2193 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_501112; TRINITY_DN47339_c5_g2_i1 2404 2425 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_501130; TRINITY_DN47339_c5_g2_i9 2461 2482 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_501135; TRINITY_DN47339_c5_g2_i13 2682 2703 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_501134; TRINITY_DN47339_c5_g2_i12 3138 3159 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_501128; TRINITY_DN47339_c5_g2_i8 3286 3307 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_501114; TRINITY_DN47339_c5_g2_i2 3359 3380 AACACCAATGGAGATCTTATTT BLAST psRNATarget
Ll_transcript_425609; TRINITY_DN36387_c0_g1_i2 66 87 ACTGCCAGCAAAGATTTTACCC BLAST psRNATarget
Ll_transcript_425608; TRINITY_DN36387_c0_g1_i1 66 87 ACTGCCAGCAAAGATTTTACCC BLAST psRNATarget
Ll_transcript_387643; TRINITY_DN50943_c0_g1_i1 1315 1336 TTTGCCAACAGAGATATTACCA BLAST psRNATarget
Ll_transcript_387660; TRINITY_DN50943_c0_g1_i4 1397 1418 TTTGCCAACAGAGATATTACCA BLAST psRNATarget
Ll_transcript_387647; TRINITY_DN50943_c0_g1_i2 1506 1527 TTTGCCAACAGAGATATTACCA BLAST psRNATarget
Ll_transcript_435837; TRINITY_DN48948_c0_g1_i2 1798 1819 CTTGAAAATAGAGGTTTTACTC BLAST psRNATarget
Ll_transcript_389860; TRINITY_DN46425_c0_g1_i1 366 387 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_389877; TRINITY_DN46425_c0_g1_i11 366 387 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_389871; TRINITY_DN46425_c0_g1_i7 366 387 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_389862; TRINITY_DN46425_c0_g1_i3 366 387 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_389875; TRINITY_DN46425_c0_g1_i10 1465 1486 GATGCCAGTGGAGATTTTGCGC BLAST psRNATarget
Ll_transcript_485274; TRINITY_DN52325_c0_g5_i1 29 50 CTAGTTAATAGAGATTTAACCT BLAST psRNATarget
Ll_transcript_305619; TRINITY_DN52271_c0_g1_i2 1940 1961 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_305638; TRINITY_DN52271_c0_g1_i18 1996 2017 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_305618; TRINITY_DN52271_c0_g1_i1 1937 1958 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_305622; TRINITY_DN52271_c0_g1_i5 1981 2002 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_458223; TRINITY_DN49966_c0_g3_i5 1766 1787 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_305629; TRINITY_DN52271_c0_g1_i10 1937 1958 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_305635; TRINITY_DN52271_c0_g1_i15 2267 2288 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_305626; TRINITY_DN52271_c0_g1_i7 1981 2002 CATGTCACTAGAGATTTTATCG BLAST psRNATarget
Ll_transcript_458220; TRINITY_DN49966_c0_g3_i3 1788 1809 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_458219; TRINITY_DN49966_c0_g3_i2 2286 2307 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_458221; TRINITY_DN49966_c0_g3_i4 1873 1894 ATTGGTGGTGGAGATCTTACCT BLAST psRNATarget
Ll_transcript_349480; TRINITY_DN52438_c3_g1_i1 225 245 ACTGCAATAGGGATCTTATCT BLAST psRNATarget
Ll_transcript_423761; TRINITY_DN47975_c1_g2_i2 801 822 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_423771; TRINITY_DN47975_c1_g2_i8 6976 6997 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_423769; TRINITY_DN47975_c1_g2_i7 7134 7155 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_423763; TRINITY_DN47975_c1_g2_i4 7155 7176 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_423768; TRINITY_DN47975_c1_g2_i6 7134 7155 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_423762; TRINITY_DN47975_c1_g2_i3 7295 7316 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget
Ll_transcript_423766; TRINITY_DN47975_c1_g2_i5 7313 7334 CTGGTTAATGGGGATCTTGTTC BLAST psRNATarget

Expression of miRNA 187


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)