Transcript | Ll_transcript_92647 |
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CDS coordinates | 208-3075 (+) |
Peptide sequence | MSDIRKWFMKSHAKVNDSASKPSSDDKVQPQKTAPGAEESSGSGRRKTSKYFDKDKEKVKEEKETPKLPAKRKNVKDSEELQIPRPSKKIHEADEDKSAMPTSYNKLADSTPAKKLKSGSGRGTPQKSAELEENDEDDDKDNVTPAKSGGRGRGGRGASTPSTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPTCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTSYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDIIRASKPVKAPLKEEPKKPLAKAVALASQSKGPPRVEAKVSLSLSSPSTQAKPKTATITQSSSTWTDKHRPKSPKDIIGNQSLVSQLRNWLKAWNEQFLDTGSKKVGKKQTGSGSQKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIGKGISGSTKNSVKELVTNESLGANMDRSKLSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQMAKRLMDVAKAEGLQVNEIALEELAERVNGDMRMAINQLQYMSLSMSVINFDDIRQRFLKNSKDEDISPFTAVDKLFGFNAGKLKMDERNNLSMSDPDLVPLLIQENYINYRPSGAGKDDSGITRMNLIAHAAESIADGDIVNVQIRRYQQWQLSQTSSVVSCIIPASLLHGQREILEQGERNFNRFGGWLGKNSTRGKNMRLLDDLHGHILASRETSPGRDTIRLEYLTLLLQHLTEPLKTLPKAEAVEKVVEFMNTYSITQEDFDTIVELSKFKGHPNLLDGIPPAVKSALTKAYKEQSKYRMVRAADQVTLRMVRGSDRVTLPEIKKAPKKRIAAILEPADEGMEQGEGETLDESEDENTSDTEELGPTAGEKLQSELQSLNSKAVQVQLELKGTGNSSSKKPSAGKGKGASASAQKAGQTSKRKR* |
ORF Type | complete |
Blastp | Replication factor C subunit 1 from Arabidopsis with 66.4% of identity |
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Blastx | Replication factor C subunit 1 from Arabidopsis with 65.96% of identity |
Eggnog | replication factor c(COG5275) |
Kegg | Link to kegg annotations (AT5G22010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413096.1) |
Pfam | BRCA1 C Terminus (BRCT) domain (PF00533.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer